RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
NEK2-201ENST00000366998 DISP2A7MBM2 1401 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 CHD1LQ86WJ1 897 aa18.74■□□□□ 0.59
NEK2-201ENST00000366998 PAPPAQ13219 1627 aa18.74■□□□□ 0.59
NEK2-201ENST00000366998 UBR2Q8IWV8 1755 aa18.74■□□□□ 0.59
NEK2-201ENST00000366998 ADCY9O60503 1353 aa18.73■□□□□ 0.59
NEK2-201ENST00000366998 GLI3P10071 1580 aa18.72■□□□□ 0.59
NEK2-201ENST00000366998 MYL6BP14649 208 aa18.72■□□□□ 0.59
NEK2-201ENST00000366998 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
NEK2-201ENST00000366998 NPM2Q86SE8 214 aaKnown RBP18.72■□□□□ 0.59
NEK2-201ENST00000366998 HMMRO75330 724 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 AIMP1Q12904 312 aaKnown RBP18.71■□□□□ 0.59
NEK2-201ENST00000366998 PDIA6Q15084 440 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 NWD2Q9ULI1 1742 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 DDX58O95786 925 aaKnown RBP18.71■□□□□ 0.59
NEK2-201ENST00000366998 UBTFL1P0CB47 393 aaPredicted RBP18.71■□□□□ 0.59
NEK2-201ENST00000366998 ANP32AP39687 249 aaKnown RBP18.71■□□□□ 0.59
NEK2-201ENST00000366998 BEND3Q5T5X7 828 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 DCTPP1Q9H773 170 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
NEK2-201ENST00000366998 ITGB4P16144 1822 aa18.7■□□□□ 0.58
NEK2-201ENST00000366998 KAT6BQ8WYB5 2073 aa18.7■□□□□ 0.58
NEK2-201ENST00000366998 USP44Q9H0E7 712 aa18.7■□□□□ 0.58
NEK2-201ENST00000366998 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
NEK2-201ENST00000366998 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
NEK2-201ENST00000366998 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
NEK2-201ENST00000366998 EXOC5O00471 708 aa18.69■□□□□ 0.58
NEK2-201ENST00000366998 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
NEK2-201ENST00000366998 SPATA31A1Q5TZJ5 1347 aa18.67■□□□□ 0.58
NEK2-201ENST00000366998 PTCD1O75127 700 aaKnown RBP18.67■□□□□ 0.58
NEK2-201ENST00000366998 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
NEK2-201ENST00000366998 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
NEK2-201ENST00000366998 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
NEK2-201ENST00000366998 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
NEK2-201ENST00000366998 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
NEK2-201ENST00000366998 BCL11AQ9H165 835 aa18.66■□□□□ 0.58
NEK2-201ENST00000366998 THRAP3Q9Y2W1 955 aaKnown RBP18.66■□□□□ 0.58
NEK2-201ENST00000366998 JCADQ9P266 1359 aa18.66■□□□□ 0.58
NEK2-201ENST00000366998 SLIT2O94813 1529 aa18.65■□□□□ 0.58
NEK2-201ENST00000366998 APBB1O00213 710 aa18.65■□□□□ 0.58
NEK2-201ENST00000366998 ALDH1L1O75891 902 aa18.65■□□□□ 0.58
NEK2-201ENST00000366998 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
NEK2-201ENST00000366998 CDCA7Q9BWT1 371 aaPredicted RBP18.65■□□□□ 0.58
NEK2-201ENST00000366998 LRP6O75581 1613 aa18.65■□□□□ 0.58
NEK2-201ENST00000366998 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
NEK2-201ENST00000366998 PNMA6EA0A0J9YXQ4 647 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 NBPF7P0C2Y1 421 aaPredicted RBP18.63■□□□□ 0.57
NEK2-201ENST00000366998 CWF19L2Q2TBE0 894 aaKnown RBP18.63■□□□□ 0.57
NEK2-201ENST00000366998 PIGBQ92521 554 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
NEK2-201ENST00000366998 DOT1LQ8TEK3 1739 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 CERKQ8TCT0 537 aa18.63■□□□□ 0.57
NEK2-201ENST00000366998 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
NEK2-201ENST00000366998 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
NEK2-201ENST00000366998 DDB1Q16531 1140 aa18.62■□□□□ 0.57
NEK2-201ENST00000366998 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
NEK2-201ENST00000366998 C8orf37Q96NL8 207 aa18.62■□□□□ 0.57
NEK2-201ENST00000366998 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
NEK2-201ENST00000366998 AFDNP55196 1824 aaKnown RBP18.62■□□□□ 0.57
NEK2-201ENST00000366998 SMARCA5O60264 1052 aaPredicted RBP18.61■□□□□ 0.57
NEK2-201ENST00000366998 ANKRD13DQ6ZTN6 518 aa18.61■□□□□ 0.57
NEK2-201ENST00000366998 SYTL4Q96C24 671 aaPredicted RBP18.61■□□□□ 0.57
NEK2-201ENST00000366998 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
NEK2-201ENST00000366998 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
NEK2-201ENST00000366998 MYD88Q99836 296 aa18.6■□□□□ 0.57
NEK2-201ENST00000366998 BCL9O00512 1426 aa18.59■□□□□ 0.57
NEK2-201ENST00000366998 A1BGP04217 495 aa18.59■□□□□ 0.57
NEK2-201ENST00000366998 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
NEK2-201ENST00000366998 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
NEK2-201ENST00000366998 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
NEK2-201ENST00000366998 METTL22Q9BUU2 404 aaPredicted RBP18.59■□□□□ 0.57
NEK2-201ENST00000366998 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
NEK2-201ENST00000366998 NBPF26B4DH59 902 aa18.58■□□□□ 0.57
NEK2-201ENST00000366998 NBPF14Q5TI25 921 aa18.58■□□□□ 0.57
NEK2-201ENST00000366998 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.57
NEK2-201ENST00000366998 NBPF15Q8N660 670 aa18.58■□□□□ 0.57
NEK2-201ENST00000366998 HDAC5Q9UQL6 1122 aa18.58■□□□□ 0.57
NEK2-201ENST00000366998 A0A0G2JS52 829 aa18.58■□□□□ 0.56
NEK2-201ENST00000366998 GRM8O00222 908 aa18.58■□□□□ 0.56
NEK2-201ENST00000366998 SEC24BO95487 1268 aa18.58■□□□□ 0.56
NEK2-201ENST00000366998 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
NEK2-201ENST00000366998 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.56
NEK2-201ENST00000366998 SSH3Q8TE77 659 aa18.58■□□□□ 0.56
NEK2-201ENST00000366998 SRGAP3O43295 1099 aa18.57■□□□□ 0.56
NEK2-201ENST00000366998 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
NEK2-201ENST00000366998 BARGINQ6ZT62 677 aa18.57■□□□□ 0.56
NEK2-201ENST00000366998 PLEKHM2Q8IWE5 1019 aa18.57■□□□□ 0.56
NEK2-201ENST00000366998 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
NEK2-201ENST00000366998 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
NEK2-201ENST00000366998 PLBD2Q8NHP8 589 aa18.56■□□□□ 0.56
NEK2-201ENST00000366998 NUP188Q5SRE5 1749 aa18.56■□□□□ 0.56
NEK2-201ENST00000366998 MSH5O43196 834 aa18.56■□□□□ 0.56
NEK2-201ENST00000366998 PRIM1P49642 420 aaKnown RBP18.56■□□□□ 0.56
NEK2-201ENST00000366998 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms