RNA–Protein interactions for RNA: ENST00000366997.8

LPGAT1-202, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPGAT1, Length 7,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-202ENST00000366997 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 DDX19AQ9NUU7 478 aaKnown RBP13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 ZNF397Q8NF99 534 aaPredicted RBP13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 CUL7Q14999 1698 aa13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 CEP131Q9UPN4 1083 aa13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 CCDC141Q6ZP82 1450 aa13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 SEC24BO95487 1268 aa13.73□□□□□ -0.21
LPGAT1-202ENST00000366997 IDH1O75874 414 aaKnown RBP13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 USP48Q86UV5 1035 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 PAXBP1Q9Y5B6 917 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 KIF14Q15058 1648 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 GSDMDP57764 484 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 CEP126Q9P2H0 1117 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 PPFIA3O75145 1194 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 GIMAP7Q8NHV1 300 aa13.72□□□□□ -0.21
LPGAT1-202ENST00000366997 NEMFO60524 1076 aa13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 LMAN1P49257 510 aa13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 TTC12Q9H892 705 aaPredicted RBP13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 WASF1Q92558 559 aa13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 GNL3LQ9NVN8 582 aaKnown RBP13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 GPATCH11Q8N954 259 aa13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 SDSP20132 328 aa13.71□□□□□ -0.21
LPGAT1-202ENST00000366997 CNNM3Q8NE01 707 aa13.71□□□□□ -0.22
LPGAT1-202ENST00000366997 ZSWIM4Q9H7M6 989 aa13.71□□□□□ -0.22
LPGAT1-202ENST00000366997 ANO6Q4KMQ2 910 aa13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC82Q8N4S0 544 aa13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 NUP88Q99567 741 aaPredicted RBP13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 DNA2P51530 1060 aa13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 BCCIPQ9P287 314 aaKnown RBP eCLIP13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 SPA17Q15506 151 aa13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 WAPLQ7Z5K2 1190 aa13.7□□□□□ -0.22
LPGAT1-202ENST00000366997 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 TAF4BQ92750 862 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 NECAB1Q8N987 351 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 PTPRCP08575 1304 aa13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 RRAGDQ9NQL2 400 aaPredicted RBP13.69□□□□□ -0.22
LPGAT1-202ENST00000366997 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 AIDAQ96BJ3 306 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 KRT222Q8N1A0 295 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 LRP2BPQ9P2M1 347 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 MCM3P25205 808 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 TNNQ9UQP3 1299 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
LPGAT1-202ENST00000366997 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 SNX21Q969T3 373 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 MYD88Q99836 296 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 V9GYY5 206 aaPredicted RBP13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 ASXL1Q8IXJ9 1541 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 C16orf71Q8IYS4 520 aaPredicted RBP13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 NME9Q86XW9 330 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 ZBTB9Q96C00 473 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 ZRSR2Q15696 482 aaKnown RBP13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 CTR9Q6PD62 1173 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC144CPQ8IYA2 1237 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 MBIPQ9NS73 344 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 IGSF3O75054 1194 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 IFIT1P09914 478 aaKnown RBP13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC186Q7Z3E2 898 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
LPGAT1-202ENST00000366997 RPGRIP1LQ68CZ1 1315 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 DYDC1Q8WWB3 177 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 MINDY4BA8MYZ0 360 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 GNG11P61952 73 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 IPO4Q8TEX9 1081 aaKnown RBP13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
LPGAT1-202ENST00000366997 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 ADGRF5Q8IZF2 1346 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 METTL24Q5JXM2 366 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 CCDC12Q8WUD4 166 aaPredicted RBP13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 ZNF213O14771 459 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms