RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
CAPN8-202ENST00000366873 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
CAPN8-202ENST00000366873 C5P01031 1676 aa12.51□□□□□ -0.41
CAPN8-202ENST00000366873 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
CAPN8-202ENST00000366873 LRP10Q7Z4F1 713 aa12.51□□□□□ -0.41
CAPN8-202ENST00000366873 PLSCR1O15162 318 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 APBA3O96018 575 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
CAPN8-202ENST00000366873 MRPL50Q8N5N7 158 aaKnown RBP12.5□□□□□ -0.41
CAPN8-202ENST00000366873 CHPF2Q9P2E5 772 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 ANXA1P04083 346 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 A1BGP04217 495 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 PIP4K2AP48426 406 aaPredicted RBP12.5□□□□□ -0.41
CAPN8-202ENST00000366873 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
CAPN8-202ENST00000366873 NBPF14Q5TI25 921 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 CCDC30Q5VVM6 783 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 NBPF10Q6P3W6 841 aaKnown RBP12.5□□□□□ -0.41
CAPN8-202ENST00000366873 NBPF15Q8N660 670 aa12.5□□□□□ -0.41
CAPN8-202ENST00000366873 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
CAPN8-202ENST00000366873 G2E3Q7L622 706 aa12.49□□□□□ -0.41
CAPN8-202ENST00000366873 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
CAPN8-202ENST00000366873 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
CAPN8-202ENST00000366873 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
CAPN8-202ENST00000366873 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
CAPN8-202ENST00000366873 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
CAPN8-202ENST00000366873 PLIN1O60240 522 aa12.48□□□□□ -0.41
CAPN8-202ENST00000366873 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
CAPN8-202ENST00000366873 DBF4Q9UBU7 674 aaPredicted RBP12.48□□□□□ -0.41
CAPN8-202ENST00000366873 LY75O60449 1722 aa12.48□□□□□ -0.41
CAPN8-202ENST00000366873 TJP1Q07157 1748 aa12.48□□□□□ -0.41
CAPN8-202ENST00000366873 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
CAPN8-202ENST00000366873 ILDR2Q71H61 639 aa12.47□□□□□ -0.41
CAPN8-202ENST00000366873 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
CAPN8-202ENST00000366873 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
CAPN8-202ENST00000366873 TNS1Q9HBL0 1735 aaKnown RBP12.47□□□□□ -0.41
CAPN8-202ENST00000366873 STARD3NLO95772 234 aa12.47□□□□□ -0.41
CAPN8-202ENST00000366873 ZNF831Q5JPB2 1677 aa12.46□□□□□ -0.41
CAPN8-202ENST00000366873 CICQ96RK0 1608 aaPredicted RBP12.46□□□□□ -0.41
CAPN8-202ENST00000366873 MYL6BP14649 208 aa12.46□□□□□ -0.41
CAPN8-202ENST00000366873 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
CAPN8-202ENST00000366873 CAMKK2Q96RR4 588 aa12.46□□□□□ -0.41
CAPN8-202ENST00000366873 ZBTB1Q9Y2K1 713 aa12.46□□□□□ -0.41
CAPN8-202ENST00000366873 EN1Q05925 392 aaPredicted RBP12.46□□□□□ -0.42
CAPN8-202ENST00000366873 STK31Q9BXU1 1019 aa12.46□□□□□ -0.42
CAPN8-202ENST00000366873 TNNQ9UQP3 1299 aa12.46□□□□□ -0.42
CAPN8-202ENST00000366873 SLC27A3Q5K4L6 730 aa12.45□□□□□ -0.42
CAPN8-202ENST00000366873 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
CAPN8-202ENST00000366873 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
CAPN8-202ENST00000366873 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
CAPN8-202ENST00000366873 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
CAPN8-202ENST00000366873 FRAT1Q92837 279 aaPredicted RBP12.45□□□□□ -0.42
CAPN8-202ENST00000366873 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
CAPN8-202ENST00000366873 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 MYH14Q7Z406 1995 aaKnown RBP12.44□□□□□ -0.42
CAPN8-202ENST00000366873 FLIIQ13045 1269 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 TRIM27P14373 513 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
CAPN8-202ENST00000366873 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 HYPKQ9NX55 129 aa12.44□□□□□ -0.42
CAPN8-202ENST00000366873 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
CAPN8-202ENST00000366873 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
CAPN8-202ENST00000366873 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
CAPN8-202ENST00000366873 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
CAPN8-202ENST00000366873 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
CAPN8-202ENST00000366873 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
CAPN8-202ENST00000366873 RLBP1P12271 317 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
CAPN8-202ENST00000366873 ATF7IPQ6VMQ6 1270 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 XAGE3Q8WTP9 111 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN8-202ENST00000366873 KIF16BQ96L93 1317 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
CAPN8-202ENST00000366873 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
CAPN8-202ENST00000366873 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 TTLL7Q6ZT98 887 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
CAPN8-202ENST00000366873 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
CAPN8-202ENST00000366873 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
CAPN8-202ENST00000366873 F6X3S4 739 aa12.41□□□□□ -0.42
CAPN8-202ENST00000366873 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
CAPN8-202ENST00000366873 PTPRCP08575 1304 aa12.41□□□□□ -0.42
CAPN8-202ENST00000366873 RREB1Q92766 1687 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 FKBP5Q13451 457 aaPredicted RBP12.4□□□□□ -0.42
CAPN8-202ENST00000366873 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 ADCY9O60503 1353 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 RPS6KA4O75676 772 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 BAG6P46379 1132 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
CAPN8-202ENST00000366873 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
CAPN8-202ENST00000366873 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
CAPN8-202ENST00000366873 C4BP0C0L5 1744 aa12.4□□□□□ -0.43
CAPN8-202ENST00000366873 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.43
CAPN8-202ENST00000366873 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms