RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 HS1BP3Q53T59 392 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 SYNE3Q6ZMZ3 975 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 GLI2P10070 1586 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 SMARCA5O60264 1052 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 CCDC192P0DO97 292 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 AKAP4Q5JQC9 854 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 STK11IPQ8N1F8 1099 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 LIMCH1Q9UPQ0 1083 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 BICD2Q8TD16 824 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 NAT10Q9H0A0 1025 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 CGNQ9P2M7 1197 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 HOOK1Q9UJC3 728 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 FOXD4L6Q3SYB3 417 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 HSP90AB2PQ58FF8 381 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 FOXD4L3Q6VB84 417 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 ZNF396Q96N95 335 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 HMGB1P09429 215 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 MTHFSDQ2M296 383 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 USP26Q9BXU7 913 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 VWDEQ8N2E2 1590 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 MSH6P52701 1360 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 DHX16O60231 1041 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 CFAP45Q9UL16 551 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 PNPLA6Q8IY17 1366 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 TTC41PQ6P2S7 1318 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 AIMP1Q12904 312 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 TRIM29Q14134 588 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 CCDC183Q5T5S1 534 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 NUTM2GQ5VZR2 741 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 IL1RAPL2Q9NP60 686 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 LRRFIP2Q9Y608 721 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 CALCOCO1Q9P1Z2 691 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 DEPDC5O75140 1603 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 F6X3S4 739 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 ZSCAN25Q6NSZ9 544 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 ZNF853P0CG23 659 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 LRSAM1Q6UWE0 723 aa6.34□□□□□ -1.39
CDC42BPA-204ENST00000366767 CDK12Q9NYV4 1490 aaPredicted RBP6.34□□□□□ -1.4
CDC42BPA-204ENST00000366767 MAP3K5Q99683 1374 aa6.34□□□□□ -1.4
CDC42BPA-204ENST00000366767 EVA1CP58658 441 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 PDCL2Q8N4E4 241 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 CPSF1Q10570 1443 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 KLHL34Q8N239 644 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 NLRP2Q9NX02 1062 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 ECHDC1Q9NTX5 307 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 XRCC6P12956 609 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 LARP1BQ659C4 914 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 AACSQ86V21 672 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 HMG20BQ9P0W2 317 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 PTCH1Q13635 1447 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 KIAA0754O94854 1291 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 CCDC158Q5M9N0 1113 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 JAKMIP1Q96N16 626 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 CTNNA3Q9UI47 895 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 TMEM2Q9UHN6 1383 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 YEATS2Q9ULM3 1422 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 MIS18AQ9NYP9 233 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 CWC27Q6UX04 472 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 NUTM1Q86Y26 1132 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 CPLX1O14810 134 aa6.33□□□□□ -1.4
CDC42BPA-204ENST00000366767 EYA1Q99502 592 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 MAP3K19Q56UN5 1328 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 QRICH2Q9H0J4 1663 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 SSH2Q76I76 1423 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 CABP4P57796 275 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 PPP1R42Q7Z4L9 355 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 DNAJC2Q99543 621 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 RAD50Q92878 1312 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 ZRANB1Q9UGI0 708 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 DLC1Q96QB1 1528 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 U3KPZ7 1027 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 PLEKHG1Q9ULL1 1385 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 A0A0G2JS52 829 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 HOXC9P31274 260 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 CEP89Q96ST8 783 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 OSBPL3Q9H4L5 887 aa6.32□□□□□ -1.4
CDC42BPA-204ENST00000366767 ZC3H13Q5T200 1668 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 NEFHP12036 1026 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 UBE2HP62256 183 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 IP6K1Q92551 441 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 NEUROD6Q96NK8 337 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 RNF214Q8ND24 703 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 PES1O00541 588 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 FBLN1P23142 703 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 ZNF445P59923 1031 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 ZSCAN23Q3MJ62 389 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 KSR2Q6VAB6 950 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 C16orf71Q8IYS4 520 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.31□□□□□ -1.41e-6■■■□□ 17.5
CDC42BPA-204ENST00000366767 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 IQSEC2Q5JU85 1478 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 CTAGE5O15320 804 aa6.31□□□□□ -1.4
CDC42BPA-204ENST00000366767 CAVIN2O95810 425 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms