RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 ZC3H4Q9UPT8 1303 aaKnown RBP11.03□□□□□ -0.64
MRPL55-211ENST00000366738 GLTPD2A6NH11 291 aa11.02□□□□□ -0.65
MRPL55-211ENST00000366738 ERVV-2B6SEH9 535 aa11.02□□□□□ -0.65
MRPL55-211ENST00000366738 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
MRPL55-211ENST00000366738 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
MRPL55-211ENST00000366738 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.65
MRPL55-211ENST00000366738 IL13P35225 146 aa11.02□□□□□ -0.65
MRPL55-211ENST00000366738 MORC1Q86VD1 984 aa11.02□□□□□ -0.65
MRPL55-211ENST00000366738 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.65
MRPL55-211ENST00000366738 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.65
MRPL55-211ENST00000366738 CCDC88AQ3V6T2 1871 aa11.02□□□□□ -0.65
MRPL55-211ENST00000366738 DLEC1Q9Y238 1755 aa11.01□□□□□ -0.65
MRPL55-211ENST00000366738 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
MRPL55-211ENST00000366738 POTECB2RU33 542 aa11.01□□□□□ -0.65
MRPL55-211ENST00000366738 SLC34A2O95436 690 aa11.01□□□□□ -0.65
MRPL55-211ENST00000366738 LMNB1P20700 586 aa11.01□□□□□ -0.65
MRPL55-211ENST00000366738 ZNF530Q6P9A1 599 aaPredicted RBP11.01□□□□□ -0.65
MRPL55-211ENST00000366738 FOXN1O15353 648 aa11□□□□□ -0.65
MRPL55-211ENST00000366738 ANP32CO43423 234 aa11□□□□□ -0.65
MRPL55-211ENST00000366738 CABP4P57796 275 aa11□□□□□ -0.65
MRPL55-211ENST00000366738 PLEKHO1Q53GL0 409 aaPredicted RBP11□□□□□ -0.65
MRPL55-211ENST00000366738 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
MRPL55-211ENST00000366738 NFKBIEO00221 500 aa10.99□□□□□ -0.65
MRPL55-211ENST00000366738 TM4SF1P30408 202 aa10.99□□□□□ -0.65
MRPL55-211ENST00000366738 USPL1Q5W0Q7 1092 aa10.99□□□□□ -0.65
MRPL55-211ENST00000366738 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
MRPL55-211ENST00000366738 CARMIL3Q8ND23 1372 aa10.99□□□□□ -0.65
MRPL55-211ENST00000366738 NRXN2Q9P2S2 1712 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 PPP2R1AP30153 589 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 MTHFSP49914 203 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 RALBP1Q15311 655 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 AMOTQ4VCS5 1084 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
MRPL55-211ENST00000366738 MIER1Q8N108 512 aa10.98□□□□□ -0.65
MRPL55-211ENST00000366738 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
MRPL55-211ENST00000366738 COL3A1P02461 1466 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-211ENST00000366738 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
MRPL55-211ENST00000366738 NFIXQ14938 502 aa10.97□□□□□ -0.65
MRPL55-211ENST00000366738 LGR6Q9HBX8 967 aa10.97□□□□□ -0.65
MRPL55-211ENST00000366738 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
MRPL55-211ENST00000366738 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-211ENST00000366738 ZPR1O75312 459 aa10.96□□□□□ -0.65
MRPL55-211ENST00000366738 HMOX1P09601 288 aa10.96□□□□□ -0.65
MRPL55-211ENST00000366738 CCDC184Q52MB2 194 aa10.96□□□□□ -0.65
MRPL55-211ENST00000366738 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
MRPL55-211ENST00000366738 DNAJC10Q8IXB1 793 aa10.96□□□□□ -0.65
MRPL55-211ENST00000366738 TTLL6Q8N841 843 aa10.96□□□□□ -0.65
MRPL55-211ENST00000366738 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
MRPL55-211ENST00000366738 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
MRPL55-211ENST00000366738 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
MRPL55-211ENST00000366738 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-211ENST00000366738 DICER1Q9UPY3 1922 aaKnown RBP10.95□□□□□ -0.66
MRPL55-211ENST00000366738 COL11A2P13942 1736 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-211ENST00000366738 MRC1P22897 1456 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 COL15A1P39059 1388 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 ANKRD31Q8N7Z5 1873 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
MRPL55-211ENST00000366738 SERPINB2P05120 415 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
MRPL55-211ENST00000366738 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
MRPL55-211ENST00000366738 FER1L6Q2WGJ9 1857 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 ERFEQ4G0M1 354 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 AIDAQ96BJ3 306 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 NARFQ9UHQ1 456 aa10.93□□□□□ -0.66
MRPL55-211ENST00000366738 PASKQ96RG2 1323 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 H0YIN7 160 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
MRPL55-211ENST00000366738 C21orf2O43822 256 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 DDNO94850 711 aaPredicted RBP10.92□□□□□ -0.66
MRPL55-211ENST00000366738 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
MRPL55-211ENST00000366738 VEGFBP49765 207 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 LBX1P52954 281 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 BICDL1Q6ZP65 573 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 ZBTB1Q9Y2K1 713 aa10.92□□□□□ -0.66
MRPL55-211ENST00000366738 CYP19A1P11511 503 aaPredicted RBP10.91□□□□□ -0.66
MRPL55-211ENST00000366738 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
MRPL55-211ENST00000366738 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
MRPL55-211ENST00000366738 ABHD8Q96I13 439 aa10.91□□□□□ -0.66
MRPL55-211ENST00000366738 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
MRPL55-211ENST00000366738 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.66
MRPL55-211ENST00000366738 DIAPH1O60610 1272 aaKnown RBP10.9□□□□□ -0.66
MRPL55-211ENST00000366738 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
MRPL55-211ENST00000366738 TAOK3Q9H2K8 898 aa10.89□□□□□ -0.67
MRPL55-211ENST00000366738 MRS2Q9HD23 443 aa10.89□□□□□ -0.67
MRPL55-211ENST00000366738 WBP1LQ9NX94 342 aa10.89□□□□□ -0.67
MRPL55-211ENST00000366738 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
MRPL55-211ENST00000366738 SLX4Q8IY92 1834 aa10.88□□□□□ -0.67
MRPL55-211ENST00000366738 TMEM88BA6NKF7 163 aa10.88□□□□□ -0.67
MRPL55-211ENST00000366738 CANXP27824 592 aaKnown RBP10.88□□□□□ -0.67
MRPL55-211ENST00000366738 LDHDQ86WU2 507 aa10.88□□□□□ -0.67
MRPL55-211ENST00000366738 IL17REQ8NFR9 667 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms