RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
YBX3-203ENST00000366286 ZBTB1Q9Y2K1 713 aa13.76□□□□□ -0.21
YBX3-203ENST00000366286 CD2APQ9Y5K6 639 aa13.76□□□□□ -0.21
YBX3-203ENST00000366286 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
YBX3-203ENST00000366286 BTBD11A6QL63 1104 aa13.75□□□□□ -0.21
YBX3-203ENST00000366286 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
YBX3-203ENST00000366286 YY1P25490 414 aa13.75□□□□□ -0.21
YBX3-203ENST00000366286 GPR162Q16538 588 aa13.75□□□□□ -0.21
YBX3-203ENST00000366286 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
YBX3-203ENST00000366286 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
YBX3-203ENST00000366286 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
YBX3-203ENST00000366286 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
YBX3-203ENST00000366286 PXDNLA1KZ92 1463 aa13.74□□□□□ -0.21
YBX3-203ENST00000366286 GOLGB1Q14789 3259 aaKnown RBP13.74□□□□□ -0.21
YBX3-203ENST00000366286 DLEC1Q9Y238 1755 aa13.73□□□□□ -0.21
YBX3-203ENST00000366286 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
YBX3-203ENST00000366286 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
YBX3-203ENST00000366286 ARFGEF1Q9Y6D6 1849 aa13.72□□□□□ -0.21
YBX3-203ENST00000366286 STARD3NLO95772 234 aa13.72□□□□□ -0.21
YBX3-203ENST00000366286 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■□□□□ 11.1
YBX3-203ENST00000366286 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
YBX3-203ENST00000366286 FKBP8Q14318 412 aa13.72□□□□□ -0.21
YBX3-203ENST00000366286 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
YBX3-203ENST00000366286 UTRNP46939 3433 aa13.71□□□□□ -0.21
YBX3-203ENST00000366286 ZPR1O75312 459 aa13.71□□□□□ -0.21
YBX3-203ENST00000366286 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.21
YBX3-203ENST00000366286 TEX13AQ9BXU3 409 aaPredicted RBP13.71□□□□□ -0.21
YBX3-203ENST00000366286 ANKRD31Q8N7Z5 1873 aa13.7□□□□□ -0.22
YBX3-203ENST00000366286 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
YBX3-203ENST00000366286 DDR1Q08345 913 aa13.7□□□□□ -0.22
YBX3-203ENST00000366286 NARFQ9UHQ1 456 aa13.7□□□□□ -0.22
YBX3-203ENST00000366286 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
YBX3-203ENST00000366286 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
YBX3-203ENST00000366286 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
YBX3-203ENST00000366286 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
YBX3-203ENST00000366286 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
YBX3-203ENST00000366286 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
YBX3-203ENST00000366286 POLRMTO00411 1230 aaKnown RBP13.68□□□□□ -0.22
YBX3-203ENST00000366286 A1BGP04217 495 aa13.68□□□□□ -0.22
YBX3-203ENST00000366286 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
YBX3-203ENST00000366286 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
YBX3-203ENST00000366286 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
YBX3-203ENST00000366286 ZNF330Q9Y3S2 320 aaPredicted RBP13.68□□□□□ -0.22
YBX3-203ENST00000366286 CACNA1SQ13698 1873 aa13.67□□□□□ -0.22
YBX3-203ENST00000366286 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
YBX3-203ENST00000366286 NUP98P52948 1817 aa13.67□□□□□ -0.22
YBX3-203ENST00000366286 A0A087WZG4 1122 aa13.67□□□□□ -0.22
YBX3-203ENST00000366286 TM4SF1P30408 202 aa13.67□□□□□ -0.22
YBX3-203ENST00000366286 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
YBX3-203ENST00000366286 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
YBX3-203ENST00000366286 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
YBX3-203ENST00000366286 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
YBX3-203ENST00000366286 RIPK4P57078 832 aa13.66□□□□□ -0.22
YBX3-203ENST00000366286 NFIXQ14938 502 aa13.66□□□□□ -0.22
YBX3-203ENST00000366286 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
YBX3-203ENST00000366286 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
YBX3-203ENST00000366286 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
YBX3-203ENST00000366286 GRIN3BO60391 1043 aa13.65□□□□□ -0.22
YBX3-203ENST00000366286 TGFB2P61812 414 aa13.65□□□□□ -0.22
YBX3-203ENST00000366286 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
YBX3-203ENST00000366286 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
YBX3-203ENST00000366286 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
YBX3-203ENST00000366286 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
YBX3-203ENST00000366286 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
YBX3-203ENST00000366286 DPEP1P16444 411 aa13.64□□□□□ -0.23
YBX3-203ENST00000366286 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
YBX3-203ENST00000366286 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
YBX3-203ENST00000366286 CARMIL3Q8ND23 1372 aa13.63□□□□□ -0.23
YBX3-203ENST00000366286 EIF4A1P60842 406 aaKnown RBP13.63□□□□□ -0.23
YBX3-203ENST00000366286 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
YBX3-203ENST00000366286 TBC1D9BQ66K14 1250 aa13.63□□□□□ -0.23
YBX3-203ENST00000366286 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
YBX3-203ENST00000366286 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
YBX3-203ENST00000366286 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
YBX3-203ENST00000366286 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
YBX3-203ENST00000366286 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
YBX3-203ENST00000366286 GIGYF1O75420 1035 aaPredicted RBP13.62□□□□□ -0.23
YBX3-203ENST00000366286 SERPINB2P05120 415 aa13.62□□□□□ -0.23
YBX3-203ENST00000366286 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
YBX3-203ENST00000366286 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
YBX3-203ENST00000366286 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
YBX3-203ENST00000366286 TSPYL4Q9UJ04 414 aa13.62□□□□□ -0.23
YBX3-203ENST00000366286 SBF1O95248 1867 aa13.61□□□□□ -0.23
YBX3-203ENST00000366286 KCNA3P22001 575 aa13.61□□□□□ -0.23
YBX3-203ENST00000366286 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
YBX3-203ENST00000366286 BCS1LQ9Y276 419 aa13.61□□□□□ -0.23
YBX3-203ENST00000366286 CHRNA5P30532 468 aa13.6□□□□□ -0.23
YBX3-203ENST00000366286 CCDC184Q52MB2 194 aa13.6□□□□□ -0.23
YBX3-203ENST00000366286 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
YBX3-203ENST00000366286 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
YBX3-203ENST00000366286 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
YBX3-203ENST00000366286 ADCY9O60503 1353 aa13.58□□□□□ -0.23
YBX3-203ENST00000366286 PIM2Q9P1W9 311 aa13.58□□□□□ -0.24
YBX3-203ENST00000366286 ATP10DQ9P241 1426 aa13.57□□□□□ -0.24
YBX3-203ENST00000366286 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
YBX3-203ENST00000366286 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
YBX3-203ENST00000366286 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
YBX3-203ENST00000366286 APAF1O14727 1248 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 ANP32CO43423 234 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 MYL6BP14649 208 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms