RNA–Protein interactions for RNA: ENST00000366170.6

VSTM1-202, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-202ENST00000366170 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
VSTM1-202ENST00000366170 CHPF2Q9P2E5 772 aa16.59■□□□□ 0.25
VSTM1-202ENST00000366170 CCNL1Q9UK58 526 aaPredicted RBP16.59■□□□□ 0.25
VSTM1-202ENST00000366170 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
VSTM1-202ENST00000366170 CACNA1FO60840 1977 aa16.58■□□□□ 0.25
VSTM1-202ENST00000366170 PLSCR1O15162 318 aa16.58■□□□□ 0.24
VSTM1-202ENST00000366170 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
VSTM1-202ENST00000366170 MYL6BP14649 208 aa16.58■□□□□ 0.24
VSTM1-202ENST00000366170 HMGB2P26583 209 aaKnown RBP16.58■□□□□ 0.24
VSTM1-202ENST00000366170 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.24
VSTM1-202ENST00000366170 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
VSTM1-202ENST00000366170 PLIN1O60240 522 aa16.57■□□□□ 0.24
VSTM1-202ENST00000366170 KCNQ4P56696 695 aa16.57■□□□□ 0.24
VSTM1-202ENST00000366170 ITPK1Q13572 414 aa16.57■□□□□ 0.24
VSTM1-202ENST00000366170 ERBB4Q15303 1308 aa16.56■□□□□ 0.24
VSTM1-202ENST00000366170 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
VSTM1-202ENST00000366170 ANXA1P04083 346 aa16.56■□□□□ 0.24
VSTM1-202ENST00000366170 RRP1P56182 461 aaKnown RBP16.56■□□□□ 0.24
VSTM1-202ENST00000366170 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
VSTM1-202ENST00000366170 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
VSTM1-202ENST00000366170 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
VSTM1-202ENST00000366170 MS4A1P11836 297 aa16.55■□□□□ 0.24
VSTM1-202ENST00000366170 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
VSTM1-202ENST00000366170 PDIA6Q15084 440 aa16.55■□□□□ 0.24
VSTM1-202ENST00000366170 TXNRD1Q16881 649 aa16.55■□□□□ 0.24
VSTM1-202ENST00000366170 G2E3Q7L622 706 aa16.55■□□□□ 0.24
VSTM1-202ENST00000366170 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
VSTM1-202ENST00000366170 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
VSTM1-202ENST00000366170 C5P01031 1676 aa16.55■□□□□ 0.24
VSTM1-202ENST00000366170 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
VSTM1-202ENST00000366170 AIMP1Q12904 312 aaKnown RBP16.54■□□□□ 0.24
VSTM1-202ENST00000366170 PROSER3Q2NL68 480 aa16.54■□□□□ 0.24
VSTM1-202ENST00000366170 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
VSTM1-202ENST00000366170 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
VSTM1-202ENST00000366170 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
VSTM1-202ENST00000366170 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 NEFLP07196 543 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 BAG6P46379 1132 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 FLIIQ13045 1269 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 FKBP5Q13451 457 aaPredicted RBP16.53■□□□□ 0.24
VSTM1-202ENST00000366170 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
VSTM1-202ENST00000366170 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 COPS6Q7L5N1 327 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 ARXQ96QS3 562 aa16.53■□□□□ 0.24
VSTM1-202ENST00000366170 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
VSTM1-202ENST00000366170 PTPRCP08575 1304 aa16.52■□□□□ 0.24
VSTM1-202ENST00000366170 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.24
VSTM1-202ENST00000366170 RC3H1Q5TC82 1133 aaKnown RBP16.52■□□□□ 0.24
VSTM1-202ENST00000366170 INTS5Q6P9B9 1019 aaKnown RBP16.52■□□□□ 0.24
VSTM1-202ENST00000366170 PROM2Q8N271 834 aa16.52■□□□□ 0.24
VSTM1-202ENST00000366170 LRRC4BQ9NT99 713 aa16.52■□□□□ 0.24
VSTM1-202ENST00000366170 LY75O60449 1722 aa16.52■□□□□ 0.24
VSTM1-202ENST00000366170 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
VSTM1-202ENST00000366170 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
VSTM1-202ENST00000366170 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
VSTM1-202ENST00000366170 DZIP1LQ8IYY4 767 aaKnown RBP16.51■□□□□ 0.23
VSTM1-202ENST00000366170 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
VSTM1-202ENST00000366170 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
VSTM1-202ENST00000366170 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
VSTM1-202ENST00000366170 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
VSTM1-202ENST00000366170 PDE3AQ14432 1141 aa16.5■□□□□ 0.23
VSTM1-202ENST00000366170 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
VSTM1-202ENST00000366170 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
VSTM1-202ENST00000366170 TJP1Q07157 1748 aa16.5■□□□□ 0.23
VSTM1-202ENST00000366170 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
VSTM1-202ENST00000366170 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
VSTM1-202ENST00000366170 TRIM27P14373 513 aa16.49■□□□□ 0.23
VSTM1-202ENST00000366170 EZH2Q15910 746 aaKnown RBP16.49■□□□□ 0.23
VSTM1-202ENST00000366170 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
VSTM1-202ENST00000366170 AK7Q96M32 723 aa16.49■□□□□ 0.23
VSTM1-202ENST00000366170 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
VSTM1-202ENST00000366170 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
VSTM1-202ENST00000366170 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
VSTM1-202ENST00000366170 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
VSTM1-202ENST00000366170 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
VSTM1-202ENST00000366170 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
VSTM1-202ENST00000366170 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
VSTM1-202ENST00000366170 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
VSTM1-202ENST00000366170 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
VSTM1-202ENST00000366170 A0A087WZG4 1122 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 GNPATO15228 680 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
VSTM1-202ENST00000366170 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
VSTM1-202ENST00000366170 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
VSTM1-202ENST00000366170 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
VSTM1-202ENST00000366170 F6X3S4 739 aa16.46■□□□□ 0.23
VSTM1-202ENST00000366170 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
VSTM1-202ENST00000366170 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
VSTM1-202ENST00000366170 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
VSTM1-202ENST00000366170 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
VSTM1-202ENST00000366170 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.23
VSTM1-202ENST00000366170 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms