RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 OVOS2Q6IE36 1432 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 LRRCC1Q9C099 1032 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 TMOD3Q9NYL9 352 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 XAGE3Q8WTP9 111 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 ACSBG1Q96GR2 724 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 FMNL2Q96PY5 1086 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 ERBB3P21860 1342 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 TNNT3P45378 269 aaPredicted RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 EIF4A1P60842 406 aaKnown RBP11.16□□□□□ -0.62
CALD1-202ENST00000361901 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
CALD1-202ENST00000361901 ARHGAP23Q9P227 1491 aa11.15□□□□□ -0.62
CALD1-202ENST00000361901 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALD1-202ENST00000361901 NGLY1Q96IV0 654 aa11.15□□□□□ -0.62
CALD1-202ENST00000361901 USP31Q70CQ4 1352 aa11.15□□□□□ -0.62
CALD1-202ENST00000361901 IL2RBP14784 551 aa11.15□□□□□ -0.62
CALD1-202ENST00000361901 NUCB1Q02818 461 aa11.15□□□□□ -0.62
CALD1-202ENST00000361901 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
CALD1-202ENST00000361901 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
CALD1-202ENST00000361901 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.63
CALD1-202ENST00000361901 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.63
CALD1-202ENST00000361901 CEP85Q6P2H3 762 aa11.15□□□□□ -0.63
CALD1-202ENST00000361901 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.63
CALD1-202ENST00000361901 EXOC5O00471 708 aa11.14□□□□□ -0.63
CALD1-202ENST00000361901 CDC45O75419 566 aa11.14□□□□□ -0.63
CALD1-202ENST00000361901 SLIT1O75093 1534 aa11.14□□□□□ -0.63
CALD1-202ENST00000361901 CLASRPQ8N2M8 674 aaKnown RBP11.14□□□□□ -0.63
CALD1-202ENST00000361901 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
CALD1-202ENST00000361901 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.14□□□□□ -0.63
CALD1-202ENST00000361901 PROSER3Q2NL68 480 aa11.14□□□□□ -0.63
CALD1-202ENST00000361901 SMC5Q8IY18 1101 aa11.14□□□□□ -0.63
CALD1-202ENST00000361901 SNRPA1P09661 255 aaKnown RBP11.13□□□□□ -0.63
CALD1-202ENST00000361901 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
CALD1-202ENST00000361901 GPATCH3Q96I76 525 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 CGNQ9P2M7 1197 aaKnown RBP11.13□□□□□ -0.63
CALD1-202ENST00000361901 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 C1orf167Q5SNV9 1468 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
CALD1-202ENST00000361901 PA2G4Q9UQ80 394 aaKnown RBP11.13□□□□□ -0.63
CALD1-202ENST00000361901 NBPF7P0C2Y1 421 aaPredicted RBP11.13□□□□□ -0.63
CALD1-202ENST00000361901 MCCP23508 829 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 UBE3BQ7Z3V4 1068 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 C8orf37Q96NL8 207 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 HYPKQ9NX55 129 aa11.13□□□□□ -0.63
CALD1-202ENST00000361901 GPTP24298 496 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 UQCRHP07919 91 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 PHKG2P15735 406 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
CALD1-202ENST00000361901 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 A0A087WZG4 1122 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 PNMA6EA0A0J9YXQ4 647 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 SLC52A2Q9HAB3 445 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
CALD1-202ENST00000361901 DIAPH3Q9NSV4 1193 aa11.11□□□□□ -0.63
CALD1-202ENST00000361901 NRXN3Q9Y4C0 1643 aa11.11□□□□□ -0.63
CALD1-202ENST00000361901 A1BGP04217 495 aa11.11□□□□□ -0.63
CALD1-202ENST00000361901 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
CALD1-202ENST00000361901 ABCC4O15439 1325 aa11.11□□□□□ -0.63
CALD1-202ENST00000361901 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
CALD1-202ENST00000361901 FOXD4L6Q3SYB3 417 aaPredicted RBP11.11□□□□□ -0.63
CALD1-202ENST00000361901 FOXD4L3Q6VB84 417 aaPredicted RBP11.11□□□□□ -0.63
CALD1-202ENST00000361901 CCDC8Q9H0W5 538 aaPredicted RBP11.11□□□□□ -0.63
CALD1-202ENST00000361901 AACSQ86V21 672 aa11.11□□□□□ -0.63
CALD1-202ENST00000361901 TOM1O60784 492 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 CBX1P83916 185 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 KSR2Q6VAB6 950 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 SIRT2Q8IXJ6 389 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 DCTPP1Q9H773 170 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 GRPEL1Q9HAV7 217 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 KLHDC4Q8TBB5 520 aa11.1□□□□□ -0.63
CALD1-202ENST00000361901 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 MX1P20591 662 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 KIF6Q6ZMV9 814 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
CALD1-202ENST00000361901 PRDM4Q9UKN5 801 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 CYP27B1O15528 508 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 REC8O95072 547 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 GOLGA6L22H0YM25 854 aa11.09□□□□□ -0.63
CALD1-202ENST00000361901 BICDL1Q6ZP65 573 aa11.08□□□□□ -0.64
CALD1-202ENST00000361901 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
CALD1-202ENST00000361901 TRAK2O60296 914 aa11.08□□□□□ -0.64
CALD1-202ENST00000361901 ATP8B2P98198 1209 aa11.08□□□□□ -0.64
CALD1-202ENST00000361901 KIF20BQ96Q89 1820 aa11.08□□□□□ -0.64
CALD1-202ENST00000361901 IRX3P78415 501 aaPredicted RBP11.08□□□□□ -0.64
CALD1-202ENST00000361901 DDX21Q9NR30 783 aaKnown RBP eCLIP11.08□□□□□ -0.64
CALD1-202ENST00000361901 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms