RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 LMBRD1Q9NUN5 540 aa20.94■□□□□ 0.94
SMG5-201ENST00000361813 H0YHG0 523 aa20.94■□□□□ 0.94
SMG5-201ENST00000361813 DACT1Q9NYF0 836 aa20.94■□□□□ 0.94
SMG5-201ENST00000361813 ANO6Q4KMQ2 910 aa20.94■□□□□ 0.94
SMG5-201ENST00000361813 F13A1P00488 732 aa20.93■□□□□ 0.94
SMG5-201ENST00000361813 NPC1L1Q9UHC9 1359 aa20.93■□□□□ 0.94
SMG5-201ENST00000361813 BIN1O00499 593 aa20.93■□□□□ 0.94
SMG5-201ENST00000361813 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
SMG5-201ENST00000361813 C17orf53Q8N3J3 647 aaPredicted RBP20.93■□□□□ 0.94
SMG5-201ENST00000361813 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
SMG5-201ENST00000361813 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
SMG5-201ENST00000361813 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMG5-201ENST00000361813 V9GYY5 206 aaPredicted RBP20.93■□□□□ 0.94
SMG5-201ENST00000361813 FSIP1Q8NA03 581 aa20.92■□□□□ 0.94
SMG5-201ENST00000361813 POLKQ9UBT6 870 aa20.92■□□□□ 0.94
SMG5-201ENST00000361813 DNMT1P26358 1616 aaKnown RBP20.92■□□□□ 0.94
SMG5-201ENST00000361813 NEMFO60524 1076 aa20.92■□□□□ 0.94
SMG5-201ENST00000361813 ERLIN1O75477 346 aa20.92■□□□□ 0.94
SMG5-201ENST00000361813 CCT2P78371 535 aaKnown RBP20.92■□□□□ 0.94
SMG5-201ENST00000361813 PAXBP1Q9Y5B6 917 aa20.92■□□□□ 0.94
SMG5-201ENST00000361813 WDR62O43379 1518 aa20.91■□□□□ 0.94
SMG5-201ENST00000361813 PATL2C9JE40 543 aaKnown RBP20.91■□□□□ 0.94
SMG5-201ENST00000361813 XBP1P17861 261 aa20.91■□□□□ 0.94
SMG5-201ENST00000361813 TRIM35Q9UPQ4 493 aa20.91■□□□□ 0.94
SMG5-201ENST00000361813 GTF2F1P35269 517 aaKnown RBP eCLIP20.91■□□□□ 0.943e-6■■■■□ 25.3
SMG5-201ENST00000361813 CCDC158Q5M9N0 1113 aa20.91■□□□□ 0.94
SMG5-201ENST00000361813 WASLO00401 505 aaPredicted RBP20.9■□□□□ 0.94
SMG5-201ENST00000361813 CTAGE5O15320 804 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 PTGS1P23219 599 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 TRMT2AQ8IZ69 625 aaKnown RBP20.9■□□□□ 0.94
SMG5-201ENST00000361813 SART3Q15020 963 aaKnown RBP20.9■□□□□ 0.94
SMG5-201ENST00000361813 USHBP1Q8N6Y0 703 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 TMC6Q7Z403 805 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 CCDC102AQ96A19 550 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 TMEM63CQ9P1W3 806 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 EIF3JO75822 258 aaKnown RBP20.9■□□□□ 0.94
SMG5-201ENST00000361813 TTC39AQ5SRH9 613 aa20.9■□□□□ 0.94
SMG5-201ENST00000361813 INTS4Q96HW7 963 aaKnown RBP20.89■□□□□ 0.94
SMG5-201ENST00000361813 SKILP12757 684 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 DNAJC25Q9H1X3 360 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 CALCOCO1Q9P1Z2 691 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 SNW1Q13573 536 aaKnown RBP20.89■□□□□ 0.93
SMG5-201ENST00000361813 VPS53Q5VIR6 699 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 KDM6BO15054 1643 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 ZNF521Q96K83 1311 aa20.89■□□□□ 0.93
SMG5-201ENST00000361813 STX1AQ16623 288 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
SMG5-201ENST00000361813 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 ANXA1P04083 346 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 AK2P54819 239 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 TMX1Q9H3N1 280 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 BRMS1Q9HCU9 246 aa20.88■□□□□ 0.93
SMG5-201ENST00000361813 CCAR1Q8IX12 1150 aaKnown RBP20.88■□□□□ 0.93
SMG5-201ENST00000361813 MAGI3Q5TCQ9 1506 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 KRT222Q8N1A0 295 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 TSC1Q92574 1164 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 CHMLP26374 656 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 TYRO3Q06418 890 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 PKP1Q13835 747 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 ESCO1Q5FWF5 840 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 ZRANB1Q9UGI0 708 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 DACH1Q9UI36 760 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 SYCP2Q9BX26 1530 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 ITSN2Q9NZM3 1697 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 SYT1P21579 422 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 VPS37DQ86XT2 251 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 TOP1P11387 765 aaKnown RBP20.87■□□□□ 0.93
SMG5-201ENST00000361813 GSDMDP57764 484 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 HSP90AB2PQ58FF8 381 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 ISM2Q6H9L7 571 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 PPP1R9BQ96SB3 815 aa20.87■□□□□ 0.93
SMG5-201ENST00000361813 CEP89Q96ST8 783 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 ZSCAN12O43309 604 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 ATP8B2P98198 1209 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
SMG5-201ENST00000361813 ARHGAP29Q52LW3 1261 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 CHAMP1Q96JM3 812 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 C8orf76Q96K31 380 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 MTMR7Q9Y216 660 aa20.86■□□□□ 0.93
SMG5-201ENST00000361813 DTNBO60941 627 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 CPA1P15085 419 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 TRIM22Q8IYM9 498 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 CTNNA3Q9UI47 895 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 U3KPZ7 1027 aaPredicted RBP20.85■□□□□ 0.93
SMG5-201ENST00000361813 ADGRL1O94910 1474 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 NOL10Q9BSC4 688 aaKnown RBP20.85■□□□□ 0.93
SMG5-201ENST00000361813 LUZP1Q86V48 1076 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 SMAP1Q8IYB5 467 aaPredicted RBP20.85■□□□□ 0.93
SMG5-201ENST00000361813 TERF1P54274 439 aa20.85■□□□□ 0.93
SMG5-201ENST00000361813 BMS1Q14692 1282 aaKnown RBP20.85■□□□□ 0.93
SMG5-201ENST00000361813 SYTL4Q96C24 671 aaPredicted RBP20.84■□□□□ 0.93
SMG5-201ENST00000361813 CAVIN2O95810 425 aa20.84■□□□□ 0.93
SMG5-201ENST00000361813 SLC3A2P08195 630 aaKnown RBP20.84■□□□□ 0.93
SMG5-201ENST00000361813 FAM193AP78312 1265 aa20.84■□□□□ 0.93
SMG5-201ENST00000361813 GADD45BO75293 160 aaPredicted RBP20.84■□□□□ 0.93
SMG5-201ENST00000361813 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
SMG5-201ENST00000361813 RBM8AQ9Y5S9 174 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms