RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 NOB1Q9ULX3 412 aaKnown RBP23.37■■□□□ 1.33
GPATCH3-201ENST00000361720 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
GPATCH3-201ENST00000361720 DZIP1LQ8IYY4 767 aaKnown RBP23.36■■□□□ 1.33
GPATCH3-201ENST00000361720 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
GPATCH3-201ENST00000361720 GIGYF1O75420 1035 aaPredicted RBP23.36■■□□□ 1.33
GPATCH3-201ENST00000361720 EIF2S2P20042 333 aaKnown RBP23.36■■□□□ 1.33
GPATCH3-201ENST00000361720 PDZRN3Q9UPQ7 1066 aa23.36■■□□□ 1.33
GPATCH3-201ENST00000361720 KCPQ6ZWJ8 1503 aa23.36■■□□□ 1.33
GPATCH3-201ENST00000361720 ONECUT3O60422 494 aaPredicted RBP23.35■■□□□ 1.33
GPATCH3-201ENST00000361720 BCL9O00512 1426 aa23.35■■□□□ 1.33
GPATCH3-201ENST00000361720 TTC5Q8N0Z6 440 aa23.35■■□□□ 1.33
GPATCH3-201ENST00000361720 ZNF428Q96B54 188 aa23.35■■□□□ 1.33
GPATCH3-201ENST00000361720 RGS17Q9UGC6 210 aaPredicted RBP23.35■■□□□ 1.33
GPATCH3-201ENST00000361720 KCNQ2O43526 872 aa23.34■■□□□ 1.33
GPATCH3-201ENST00000361720 PTCD1O75127 700 aaKnown RBP23.33■■□□□ 1.33
GPATCH3-201ENST00000361720 PTF1AQ7RTS3 328 aa23.33■■□□□ 1.33
GPATCH3-201ENST00000361720 HDGFL1Q5TGJ6 251 aa23.33■■□□□ 1.32
GPATCH3-201ENST00000361720 G2E3Q7L622 706 aa23.33■■□□□ 1.32
GPATCH3-201ENST00000361720 FTSJ3Q8IY81 847 aaKnown RBP23.33■■□□□ 1.32
GPATCH3-201ENST00000361720 ZNF772Q68DY9 489 aaPredicted RBP23.32■■□□□ 1.32
GPATCH3-201ENST00000361720 ATG3Q9NT62 314 aa23.32■■□□□ 1.32
GPATCH3-201ENST00000361720 SEC24BO95487 1268 aa23.32■■□□□ 1.32
GPATCH3-201ENST00000361720 ANXA1P04083 346 aa23.32■■□□□ 1.32
GPATCH3-201ENST00000361720 TRIM27P14373 513 aa23.32■■□□□ 1.32
GPATCH3-201ENST00000361720 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
GPATCH3-201ENST00000361720 BECN1Q14457 450 aa23.3■■□□□ 1.32
GPATCH3-201ENST00000361720 BRPF1P55201 1214 aaPredicted RBP23.3■■□□□ 1.32
GPATCH3-201ENST00000361720 FMNL2Q96PY5 1086 aa23.3■■□□□ 1.32
GPATCH3-201ENST00000361720 CCDC30Q5VVM6 783 aa23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 CHPF2Q9P2E5 772 aa23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 KIF16BQ96L93 1317 aa23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 HDAC1Q13547 482 aaPredicted RBP23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 GSE1Q14687 1217 aa23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 DDX19BQ9UMR2 479 aa23.29■■□□□ 1.32
GPATCH3-201ENST00000361720 PROSER3Q2NL68 480 aa23.28■■□□□ 1.32
GPATCH3-201ENST00000361720 ATF7IPQ6VMQ6 1270 aa23.28■■□□□ 1.32
GPATCH3-201ENST00000361720 UPF2Q9HAU5 1272 aaKnown RBP23.28■■□□□ 1.32
GPATCH3-201ENST00000361720 HOXB7P09629 217 aa23.27■■□□□ 1.32
GPATCH3-201ENST00000361720 PIP4K2AP48426 406 aaPredicted RBP23.27■■□□□ 1.32
GPATCH3-201ENST00000361720 LAMB4A4D0S4 1761 aa23.27■■□□□ 1.32
GPATCH3-201ENST00000361720 SBF2Q86WG5 1849 aa23.27■■□□□ 1.32
GPATCH3-201ENST00000361720 RBM6P78332 1123 aaKnown RBP23.27■■□□□ 1.32
GPATCH3-201ENST00000361720 POTEAQ6S8J7 498 aa23.27■■□□□ 1.32
GPATCH3-201ENST00000361720 CACNA1FO60840 1977 aa23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 PHAXQ9H814 394 aaKnown RBP23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 SOS1Q07889 1333 aaPredicted RBP23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 RGS12O14924 1447 aa23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 SNRPA1P09661 255 aaKnown RBP23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 TBC1D32Q96NH3 1257 aa23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 STK31Q9BXU1 1019 aa23.26■■□□□ 1.31
GPATCH3-201ENST00000361720 RBM42Q9BTD8 480 aaKnown RBP23.25■■□□□ 1.31
GPATCH3-201ENST00000361720 NHSQ6T4R5 1651 aa23.23■■□□□ 1.31
GPATCH3-201ENST00000361720 BTAF1O14981 1849 aa23.23■■□□□ 1.31
GPATCH3-201ENST00000361720 IPO8O15397 1037 aaKnown RBP23.23■■□□□ 1.31
GPATCH3-201ENST00000361720 PDIA6Q15084 440 aa23.23■■□□□ 1.31
GPATCH3-201ENST00000361720 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
GPATCH3-201ENST00000361720 FLIIQ13045 1269 aa23.21■■□□□ 1.31
GPATCH3-201ENST00000361720 F6X3S4 739 aa23.21■■□□□ 1.31
GPATCH3-201ENST00000361720 RXRBP28702 533 aa23.21■■□□□ 1.31
GPATCH3-201ENST00000361720 DNAJC10Q8IXB1 793 aa23.21■■□□□ 1.31
GPATCH3-201ENST00000361720 TJP1Q07157 1748 aa23.21■■□□□ 1.31
GPATCH3-201ENST00000361720 KRT27Q7Z3Y8 459 aa23.2■■□□□ 1.3
GPATCH3-201ENST00000361720 ITPRIPQ8IWB1 547 aa23.2■■□□□ 1.3
GPATCH3-201ENST00000361720 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
GPATCH3-201ENST00000361720 MYL6BP14649 208 aa23.2■■□□□ 1.3
GPATCH3-201ENST00000361720 SMC5Q8IY18 1101 aa23.19■■□□□ 1.3
GPATCH3-201ENST00000361720 ARHGAP45Q92619 1136 aa23.19■■□□□ 1.3
GPATCH3-201ENST00000361720 A1BGP04217 495 aa23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 ABCC4O15439 1325 aa23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 PALLDQ8WX93 1383 aa23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 ZBTB40Q9NUA8 1239 aa23.18■■□□□ 1.3
GPATCH3-201ENST00000361720 NBPF26B4DH59 902 aa23.17■■□□□ 1.3
GPATCH3-201ENST00000361720 NBPF14Q5TI25 921 aa23.17■■□□□ 1.3
GPATCH3-201ENST00000361720 NBPF10Q6P3W6 841 aaKnown RBP23.17■■□□□ 1.3
GPATCH3-201ENST00000361720 NBPF15Q8N660 670 aa23.17■■□□□ 1.3
GPATCH3-201ENST00000361720 DDX21Q9NR30 783 aaKnown RBP eCLIP23.17■■□□□ 1.3
GPATCH3-201ENST00000361720 PTPRCP08575 1304 aa23.16■■□□□ 1.3
GPATCH3-201ENST00000361720 KCNQ4P56696 695 aa23.16■■□□□ 1.3
GPATCH3-201ENST00000361720 LRP10Q7Z4F1 713 aa23.16■■□□□ 1.3
GPATCH3-201ENST00000361720 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
GPATCH3-201ENST00000361720 AIMP1Q12904 312 aaKnown RBP23.15■■□□□ 1.3
GPATCH3-201ENST00000361720 LOC102724428A0A0B4J2F2 783 aa23.14■■□□□ 1.29
GPATCH3-201ENST00000361720 SIK1P57059 783 aa23.14■■□□□ 1.29
GPATCH3-201ENST00000361720 ITPK1Q13572 414 aa23.13■■□□□ 1.29
GPATCH3-201ENST00000361720 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
GPATCH3-201ENST00000361720 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
GPATCH3-201ENST00000361720 ANTXR1Q9H6X2 564 aa23.13■■□□□ 1.29
GPATCH3-201ENST00000361720 ADCY9O60503 1353 aa23.12■■□□□ 1.29
GPATCH3-201ENST00000361720 XAGE3Q8WTP9 111 aa23.12■■□□□ 1.29
GPATCH3-201ENST00000361720 ATP6V1AP38606 617 aa23.11■■□□□ 1.29
GPATCH3-201ENST00000361720 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
GPATCH3-201ENST00000361720 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
GPATCH3-201ENST00000361720 TRIM37O94972 964 aa23.11■■□□□ 1.29
GPATCH3-201ENST00000361720 CYP19A1P11511 503 aaPredicted RBP23.11■■□□□ 1.29
GPATCH3-201ENST00000361720 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms