RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
CNOT4-203ENST00000361528 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 ADAM21Q9UKJ8 722 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 TTC36A6NLP5 189 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 SGSM2O43147 1006 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 C21orf2O43822 256 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
CNOT4-203ENST00000361528 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
CNOT4-203ENST00000361528 SHPRHQ149N8 1683 aa13.65□□□□□ -0.22
CNOT4-203ENST00000361528 GSPT1P15170 499 aaKnown RBP13.65□□□□□ -0.22
CNOT4-203ENST00000361528 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
CNOT4-203ENST00000361528 LMAN1P49257 510 aa13.65□□□□□ -0.22
CNOT4-203ENST00000361528 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
CNOT4-203ENST00000361528 LRRC8AQ8IWT6 810 aa13.65□□□□□ -0.22
CNOT4-203ENST00000361528 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-203ENST00000361528 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
CNOT4-203ENST00000361528 MYOM1P52179 1685 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 A0A087WUV0 522 aaPredicted RBP13.64□□□□□ -0.23
CNOT4-203ENST00000361528 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 A1CFQ9NQ94 594 aaKnown RBP13.64□□□□□ -0.23
CNOT4-203ENST00000361528 A2MP01023 1474 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 CAVIN2O95810 425 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 ERCC3P19447 782 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 CCAR2Q8N163 923 aaKnown RBP13.64□□□□□ -0.23
CNOT4-203ENST00000361528 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
CNOT4-203ENST00000361528 GDPD2Q9HCC8 539 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 CLIP2Q9UDT6 1046 aa13.64□□□□□ -0.23
CNOT4-203ENST00000361528 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.64□□□□□ -0.237e-7■□□□□ 9.6
CNOT4-203ENST00000361528 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
CNOT4-203ENST00000361528 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 SMC2O95347 1197 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 MAP9Q49MG5 647 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 UBXN4Q92575 508 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 TRIM5Q9C035 493 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 WDR62O43379 1518 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 TADA2BQ86TJ2 420 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 NBPF5PQ86XG9 351 aaPredicted RBP13.63□□□□□ -0.23
CNOT4-203ENST00000361528 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
CNOT4-203ENST00000361528 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
CNOT4-203ENST00000361528 TBC1D8O95759 1140 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
CNOT4-203ENST00000361528 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 NRBP1Q9UHY1 535 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 NOB1Q9ULX3 412 aaKnown RBP13.62□□□□□ -0.23
CNOT4-203ENST00000361528 SHANK2Q9UPX8 1470 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
CNOT4-203ENST00000361528 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
CNOT4-203ENST00000361528 IRX1P78414 480 aaPredicted RBP13.62□□□□□ -0.23
CNOT4-203ENST00000361528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.237e-7■■■■□ 23.2
CNOT4-203ENST00000361528 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 STK26Q9P289 416 aa13.62□□□□□ -0.23
CNOT4-203ENST00000361528 NEK4P51957 841 aa13.61□□□□□ -0.23
CNOT4-203ENST00000361528 ANAPC15P60006 121 aa13.61□□□□□ -0.23
CNOT4-203ENST00000361528 PPP2R5AQ15172 486 aa13.61□□□□□ -0.23
CNOT4-203ENST00000361528 PLEKHM2Q8IWE5 1019 aa13.61□□□□□ -0.23
CNOT4-203ENST00000361528 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
CNOT4-203ENST00000361528 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
CNOT4-203ENST00000361528 EFCAB8A8MWE9 144 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 SKILP12757 684 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 KCNJ6P48051 423 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 SETQ01105 290 aaPredicted RBP13.6□□□□□ -0.23
CNOT4-203ENST00000361528 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
CNOT4-203ENST00000361528 MAP3K11Q16584 847 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 IL17RAQ96F46 866 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 MRFAP1L1Q96HT8 127 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 MRVI1Q9Y6F6 885 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 ZNF644Q9H582 1327 aaPredicted RBP13.6□□□□□ -0.23
CNOT4-203ENST00000361528 RGS12O14924 1447 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 ERC2O15083 957 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 TYRO3Q06418 890 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
CNOT4-203ENST00000361528 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
CNOT4-203ENST00000361528 ITFG2Q969R8 447 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 UTP14AQ9BVJ6 771 aaKnown RBP13.6□□□□□ -0.23
CNOT4-203ENST00000361528 CNPY2Q9Y2B0 182 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
CNOT4-203ENST00000361528 H0YHG0 523 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 SARNPP82979 210 aaKnown RBP13.59□□□□□ -0.23
CNOT4-203ENST00000361528 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 FAM210AQ96ND0 272 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 ZCCHC17Q9NP64 241 aaKnown RBP13.59□□□□□ -0.23
CNOT4-203ENST00000361528 ADGRB2O60241 1585 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 NPHP1O15259 732 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 ZSCAN22P10073 491 aaPredicted RBP13.59□□□□□ -0.23
CNOT4-203ENST00000361528 BIRC2Q13490 618 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 JAKMIP3Q5VZ66 844 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms