RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 SMC5Q8IY18 1101 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 TSPYL6Q8N831 410 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 A0A087WZG4 1122 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 H0YHG0 523 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
VCP-201ENST00000358901 RHPN1Q8TCX5 695 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 SNX21Q969T3 373 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 CCDC82Q8N4S0 544 aa16.06■□□□□ 0.16
VCP-201ENST00000358901 CLCN1P35523 988 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 ZNF165P49910 485 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 DDX19AQ9NUU7 478 aaKnown RBP16.05■□□□□ 0.16
VCP-201ENST00000358901 RAI14Q9P0K7 980 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 UBE2HP62256 183 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 CBX1P83916 185 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 ZBTB40Q9NUA8 1239 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
VCP-201ENST00000358901 ACEP12821 1306 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 KRT18P05783 430 aaKnown RBP16.05■□□□□ 0.16
VCP-201ENST00000358901 GIMAP6Q6P9H5 292 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 KIF18AQ8NI77 898 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
VCP-201ENST00000358901 MAP3K2Q9Y2U5 619 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 ATP10BO94823 1461 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 TCEANC2Q96MN5 208 aa16.05■□□□□ 0.16
VCP-201ENST00000358901 VAMP4O75379 141 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 TNNT1P13805 278 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 FANCAO15360 1455 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
VCP-201ENST00000358901 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 FSIP1Q8NA03 581 aa16.04■□□□□ 0.16
VCP-201ENST00000358901 ERLIN1O75477 346 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 NUP160Q12769 1436 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 MCM5P33992 734 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 ESYT1Q9BSJ8 1104 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 PDCL3Q9H2J4 239 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 AKAP2Q9Y2D5 859 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 WASF1Q92558 559 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 ZFYVE27Q5T4F4 411 aa16.03■□□□□ 0.16
VCP-201ENST00000358901 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.16
VCP-201ENST00000358901 BIN1O00499 593 aa16.02■□□□□ 0.16
VCP-201ENST00000358901 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
VCP-201ENST00000358901 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
VCP-201ENST00000358901 ZRANB1Q9UGI0 708 aa16.02■□□□□ 0.16
VCP-201ENST00000358901 URI1O94763 535 aaPredicted RBP16.02■□□□□ 0.15
VCP-201ENST00000358901 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.15
VCP-201ENST00000358901 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.15
VCP-201ENST00000358901 TANGO6Q9C0B7 1094 aa16.02■□□□□ 0.15
VCP-201ENST00000358901 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 GOLIM4O00461 696 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 CTAGE5O15320 804 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
VCP-201ENST00000358901 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
VCP-201ENST00000358901 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 SNRKQ9NRH2 765 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 NAPBQ9H115 298 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 JARID2Q92833 1246 aaPredicted RBP16.01■□□□□ 0.15
VCP-201ENST00000358901 PRM3Q9NNZ6 103 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 ZNF213O14771 459 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
VCP-201ENST00000358901 ODF2Q5BJF6 829 aa16.01■□□□□ 0.15
VCP-201ENST00000358901 PIK3C2GO75747 1445 aa16■□□□□ 0.15
VCP-201ENST00000358901 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
VCP-201ENST00000358901 STARD3NLO95772 234 aa16■□□□□ 0.15
VCP-201ENST00000358901 CCDC181Q5TID7 509 aa16■□□□□ 0.15
VCP-201ENST00000358901 NEK1Q96PY6 1258 aa16■□□□□ 0.15
VCP-201ENST00000358901 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
VCP-201ENST00000358901 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
VCP-201ENST00000358901 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
VCP-201ENST00000358901 TSPYL1Q9H0U9 437 aa16■□□□□ 0.15
VCP-201ENST00000358901 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
VCP-201ENST00000358901 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
VCP-201ENST00000358901 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
VCP-201ENST00000358901 ZGPATQ8N5A5 531 aaKnown RBP16■□□□□ 0.15
VCP-201ENST00000358901 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
VCP-201ENST00000358901 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
VCP-201ENST00000358901 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
VCP-201ENST00000358901 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
VCP-201ENST00000358901 EIF5P55010 431 aaKnown RBP15.99■□□□□ 0.15
VCP-201ENST00000358901 USP48Q86UV5 1035 aa15.99■□□□□ 0.15
VCP-201ENST00000358901 HAND2P61296 217 aa15.99■□□□□ 0.15
VCP-201ENST00000358901 BRF1Q92994 677 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms