RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ECHDC1Q9NTX5 307 aa14.61□□□□□ -0.07
COL20A1-201ENST00000358894 KDM4AO75164 1064 aa14.61□□□□□ -0.07
COL20A1-201ENST00000358894 SPC24Q8NBT2 197 aa14.61□□□□□ -0.07
COL20A1-201ENST00000358894 PA2G4Q9UQ80 394 aaKnown RBP14.61□□□□□ -0.07
COL20A1-201ENST00000358894 ZSCAN23Q3MJ62 389 aa14.61□□□□□ -0.07
COL20A1-201ENST00000358894 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
COL20A1-201ENST00000358894 PTCD1O75127 700 aaKnown RBP14.6□□□□□ -0.07
COL20A1-201ENST00000358894 CD2BP2O95400 341 aaKnown RBP14.6□□□□□ -0.07
COL20A1-201ENST00000358894 CLCN1P35523 988 aa14.6□□□□□ -0.07
COL20A1-201ENST00000358894 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
COL20A1-201ENST00000358894 TOM1L2Q6ZVM7 507 aa14.6□□□□□ -0.07
COL20A1-201ENST00000358894 ANKRD24Q8TF21 1146 aa14.6□□□□□ -0.07
COL20A1-201ENST00000358894 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
COL20A1-201ENST00000358894 KRT85P78386 507 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 BBXQ8WY36 941 aaPredicted RBP14.59□□□□□ -0.07
COL20A1-201ENST00000358894 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 CEP152O94986 1710 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 LRRFIP1Q32MZ4 808 aaKnown RBP14.59□□□□□ -0.07
COL20A1-201ENST00000358894 LARP1Q6PKG0 1096 aaKnown RBP14.59□□□□□ -0.07
COL20A1-201ENST00000358894 DDX11Q96FC9 970 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 GLI2P10070 1586 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 CHMLP26374 656 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
COL20A1-201ENST00000358894 CWF19L2Q2TBE0 894 aaKnown RBP14.59□□□□□ -0.07
COL20A1-201ENST00000358894 CCDC73Q6ZRK6 1079 aa14.59□□□□□ -0.07
COL20A1-201ENST00000358894 ADGRB3O60242 1522 aa14.58□□□□□ -0.07
COL20A1-201ENST00000358894 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
COL20A1-201ENST00000358894 MAP3K5Q99683 1374 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 FAM177BA6PVY3 158 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 DTNBO60941 627 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 TRDNQ13061 729 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.08
COL20A1-201ENST00000358894 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
COL20A1-201ENST00000358894 LGR6Q9HBX8 967 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 PPRC1Q5VV67 1664 aaKnown RBP14.57□□□□□ -0.08
COL20A1-201ENST00000358894 ZNF853P0CG23 659 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 HYPKQ9NX55 129 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 TBX22Q9Y458 520 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
COL20A1-201ENST00000358894 TPM4P67936 248 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 FKBP4Q02790 459 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL20A1-201ENST00000358894 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 SOS1Q07889 1333 aaPredicted RBP14.57□□□□□ -0.08
COL20A1-201ENST00000358894 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 CFAP74Q9C0B2 1584 aa14.57□□□□□ -0.08
COL20A1-201ENST00000358894 CHRNA2Q15822 529 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 PRIM1P49642 420 aaKnown RBP14.56□□□□□ -0.08
COL20A1-201ENST00000358894 ANKRD1Q15327 319 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 LETM1O95202 739 aaPredicted RBP14.56□□□□□ -0.08
COL20A1-201ENST00000358894 CAMK4Q16566 473 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 CPLX2Q6PUV4 134 aaKnown RBP14.56□□□□□ -0.08
COL20A1-201ENST00000358894 UBE3BQ7Z3V4 1068 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 NECAB1Q8N987 351 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 SDF4Q9BRK5 362 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 IQGAP1P46940 1657 aa14.56□□□□□ -0.08
COL20A1-201ENST00000358894 STX6O43752 255 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 CPA1P15085 419 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 TULP4Q9NRJ4 1543 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 FAM135BQ49AJ0 1406 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 A0A087WZG4 1122 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 NBPF7P0C2Y1 421 aaPredicted RBP14.55□□□□□ -0.08
COL20A1-201ENST00000358894 CCDC192P0DO97 292 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 PKP1Q13835 747 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 USP25Q9UHP3 1055 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 ABCA9Q8IUA7 1624 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 GJB2P29033 226 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 SPATA32Q96LK8 384 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 TNMDQ9H2S6 317 aa14.55□□□□□ -0.08
COL20A1-201ENST00000358894 ROBO2Q9HCK4 1378 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 NFXL1Q6ZNB6 911 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 CHAMP1Q96JM3 812 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-201ENST00000358894 ANAPC15P60006 121 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 CBX1P83916 185 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 AATKQ6ZMQ8 1374 aa14.54□□□□□ -0.08
COL20A1-201ENST00000358894 ATP7BP35670 1465 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 AKAP4Q5JQC9 854 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 CHMP4CQ96CF2 233 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 TFIP11Q9UBB9 837 aaKnown RBP14.53□□□□□ -0.08
COL20A1-201ENST00000358894 INO80Q9ULG1 1556 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-201ENST00000358894 SYNE3Q6ZMZ3 975 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 COPS6Q7L5N1 327 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 GCP02774 474 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 XAGE3Q8WTP9 111 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
COL20A1-201ENST00000358894 GRM8O00222 908 aa14.52□□□□□ -0.08
COL20A1-201ENST00000358894 KSR2Q6VAB6 950 aa14.52□□□□□ -0.08
COL20A1-201ENST00000358894 CREBRFQ8IUR6 639 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms