RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RAB11FIP3O75154 756 aa10.45□□□□□ -0.74
RFX3-202ENST00000358730 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
RFX3-202ENST00000358730 RBM33Q96EV2 1170 aaKnown RBP10.45□□□□□ -0.74
RFX3-202ENST00000358730 UPF3BQ9BZI7 483 aaKnown RBP10.45□□□□□ -0.74
RFX3-202ENST00000358730 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
RFX3-202ENST00000358730 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
RFX3-202ENST00000358730 POLA2Q14181 598 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 RHPN1Q8TCX5 695 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 GPT2Q8TD30 523 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 IL25Q9H293 177 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 LMO7Q8WWI1 1683 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
RFX3-202ENST00000358730 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 NBPF7P0C2Y1 421 aaPredicted RBP10.44□□□□□ -0.74
RFX3-202ENST00000358730 TEFQ10587 303 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 PI4KAP1Q8N8J0 262 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
RFX3-202ENST00000358730 HOXB7P09629 217 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 CUL4AQ13619 759 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 KIF1BPQ96EK5 621 aa10.44□□□□□ -0.74
RFX3-202ENST00000358730 RBM27Q9P2N5 1060 aaKnown RBP10.44□□□□□ -0.74
RFX3-202ENST00000358730 KCNQ3O43525 872 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 ANXA1P04083 346 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 ZNF530Q6P9A1 599 aaPredicted RBP10.43□□□□□ -0.74
RFX3-202ENST00000358730 PI4K2BQ8TCG2 481 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 PSME1Q06323 249 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 BEND3Q5T5X7 828 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 LRRC59Q96AG4 307 aaKnown RBP10.43□□□□□ -0.74
RFX3-202ENST00000358730 PPP1R9BQ96SB3 815 aa10.43□□□□□ -0.74
RFX3-202ENST00000358730 BRD1O95696 1058 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 ESCO1Q5FWF5 840 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 INTS4Q96HW7 963 aaKnown RBP10.42□□□□□ -0.74
RFX3-202ENST00000358730 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 HSPA4P34932 840 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 CHMP4AQ9BY43 222 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 PHRF1Q9P1Y6 1649 aaKnown RBP10.42□□□□□ -0.74
RFX3-202ENST00000358730 RAD50Q92878 1312 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 ADCY9O60503 1353 aa10.42□□□□□ -0.74
RFX3-202ENST00000358730 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
RFX3-202ENST00000358730 AKAP4Q5JQC9 854 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 CNTROBQ8N137 903 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 PXDNQ92626 1479 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 EPB41L2O43491 1005 aaKnown RBP10.41□□□□□ -0.74
RFX3-202ENST00000358730 PRIM1P49642 420 aaKnown RBP10.41□□□□□ -0.74
RFX3-202ENST00000358730 TMEM63CQ9P1W3 806 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 SGSM2O43147 1006 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 MBD3O95983 291 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 PLEKHO1Q53GL0 409 aaPredicted RBP10.41□□□□□ -0.74
RFX3-202ENST00000358730 HSP90AB4PQ58FF6 505 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 RBSNQ9H1K0 784 aa10.41□□□□□ -0.74
RFX3-202ENST00000358730 CRYBG1Q9Y4K1 1723 aa10.4□□□□□ -0.74
RFX3-202ENST00000358730 SYCE3A1L190 88 aa10.4□□□□□ -0.74
RFX3-202ENST00000358730 C1orf141Q5JVX7 400 aa10.4□□□□□ -0.74
RFX3-202ENST00000358730 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
RFX3-202ENST00000358730 DBF4Q9UBU7 674 aaPredicted RBP10.4□□□□□ -0.75
RFX3-202ENST00000358730 NCAPD2Q15021 1401 aa10.4□□□□□ -0.75
RFX3-202ENST00000358730 FOXD4L6Q3SYB3 417 aaPredicted RBP10.39□□□□□ -0.75
RFX3-202ENST00000358730 FOXD4L3Q6VB84 417 aaPredicted RBP10.39□□□□□ -0.75
RFX3-202ENST00000358730 ANKLE2Q86XL3 938 aa10.39□□□□□ -0.75
RFX3-202ENST00000358730 XPCQ01831 940 aaPredicted RBP10.39□□□□□ -0.75
RFX3-202ENST00000358730 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
RFX3-202ENST00000358730 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
RFX3-202ENST00000358730 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
RFX3-202ENST00000358730 MAP3K2Q9Y2U5 619 aa10.39□□□□□ -0.75
RFX3-202ENST00000358730 RNMTO43148 476 aaKnown RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 LRSAM1Q6UWE0 723 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 LSG1Q9H089 658 aaKnown RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 SNX14Q9Y5W7 946 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 TTC41PQ6P2S7 1318 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 GLRX3O76003 335 aaKnown RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 PROSER3Q2NL68 480 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 ZSCAN30Q86W11 494 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 CLASRPQ8N2M8 674 aaKnown RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 USP42Q9H9J4 1324 aaKnown RBP10.38□□□□□ -0.75
RFX3-202ENST00000358730 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 DIAPH3Q9NSV4 1193 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
RFX3-202ENST00000358730 OVOS2A0A0G2JMS6 1433 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 TCHHQ07283 1943 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 GCP02774 474 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 MTX1Q13505 466 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 ZNF142P52746 1687 aaPredicted RBP10.37□□□□□ -0.75
RFX3-202ENST00000358730 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
RFX3-202ENST00000358730 MSNP26038 577 aaKnown RBP10.37□□□□□ -0.75
RFX3-202ENST00000358730 CWF19L2Q2TBE0 894 aaKnown RBP10.37□□□□□ -0.75
RFX3-202ENST00000358730 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 ANKRD24Q8TF21 1146 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 GDPD2Q9HCC8 539 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 SLIT3O75094 1523 aa10.37□□□□□ -0.75
RFX3-202ENST00000358730 RPAP1Q9BWH6 1393 aaPredicted RBP10.36□□□□□ -0.75
RFX3-202ENST00000358730 PRAMEF22A3QJZ6 481 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms