RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SSR1P43307 286 aaKnown RBP10.15□□□□□ -0.78
COL6A6-201ENST00000358511 PRIM1P49642 420 aaKnown RBP10.15□□□□□ -0.78
COL6A6-201ENST00000358511 CKAP4Q07065 602 aaKnown RBP10.15□□□□□ -0.78
COL6A6-201ENST00000358511 C8orf34Q49A92 452 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 KDM4AO75164 1064 aa10.15□□□□□ -0.79
COL6A6-201ENST00000358511 VPS36Q86VN1 386 aa10.15□□□□□ -0.79
COL6A6-201ENST00000358511 ZNF830Q96NB3 372 aaPredicted RBP10.15□□□□□ -0.79
COL6A6-201ENST00000358511 U3KPZ7 1027 aaPredicted RBP10.15□□□□□ -0.79
COL6A6-201ENST00000358511 TMEM132AQ24JP5 1023 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 MICALL1Q8N3F8 863 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 CTAGE9A4FU28 777 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 RAB11FIP3O75154 756 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 AEBP2Q6ZN18 517 aaPredicted RBP10.14□□□□□ -0.79
COL6A6-201ENST00000358511 MYRIPQ8NFW9 859 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 FKBP15Q5T1M5 1219 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 SRGAP3O43295 1099 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 MAPKBP1O60336 1514 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 PIP4K2BP78356 416 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 RSRC1Q96IZ7 334 aaKnown RBP10.14□□□□□ -0.79
COL6A6-201ENST00000358511 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
COL6A6-201ENST00000358511 AIMP1Q12904 312 aaKnown RBP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 TTC12Q9H892 705 aaPredicted RBP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 NSD3Q9BZ95 1437 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 ZNF644Q9H582 1327 aaPredicted RBP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 DUSP27Q5VZP5 1158 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 HMGB1P09429 215 aaKnown RBP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 ANO6Q4KMQ2 910 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 NACAP1Q9BZK3 213 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 CAMSAP2Q08AD1 1489 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 IGF1RP08069 1367 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 RALGAPBQ86X10 1494 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 GLRX3O76003 335 aaKnown RBP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 TUBBP07437 444 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 HLTFQ14527 1009 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 GOPCQ9HD26 462 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL6A6-201ENST00000358511 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 MAATS1Q7Z4T9 603 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 CEP57Q86XR8 500 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 PPM1EQ8WY54 764 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 JADE2Q9NQC1 790 aa10.13□□□□□ -0.79
COL6A6-201ENST00000358511 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 FSIP1Q8NA03 581 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 NSRP1Q9H0G5 558 aaKnown RBP10.12□□□□□ -0.79
COL6A6-201ENST00000358511 A0A1B0GUA9 196 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 KLHL10Q6JEL2 608 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 SSH1Q8WYL5 1049 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 OPA1O60313 960 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 GIMAP6Q6P9H5 292 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 KRBA2Q6ZNG9 492 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 NBPF11Q86T75 865 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 CCDC57Q2TAC2 916 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 TTC39AQ5SRH9 613 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 RPRD2Q5VT52 1461 aaKnown RBP10.12□□□□□ -0.79
COL6A6-201ENST00000358511 C8orf76Q96K31 380 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 GJB2P29033 226 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 VPS18Q9P253 973 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 KIF14Q15058 1648 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
COL6A6-201ENST00000358511 TRIM27P14373 513 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 LIG1P18858 919 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CCDC121Q6ZUS5 278 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 OTUD6BQ8N6M0 293 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 PHAXQ9H814 394 aaKnown RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 FGFR1OPO95684 399 aaKnown RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 ZSCAN22P10073 491 aaPredicted RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 ZSCAN25Q6NSZ9 544 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 KIF1BPQ96EK5 621 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 FYB1O15117 783 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 HDXQ7Z353 690 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 ZSCAN16Q9H4T2 348 aaPredicted RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 DNAI1Q9UI46 699 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 PRXQ9BXM0 1461 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 TMPOP42166 694 aaKnown RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 BMP2KQ9NSY1 1161 aaPredicted RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CTAGE15A4D2H0 777 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CTAGE8P0CG41 777 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 NUCB1Q02818 461 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 C6orf163Q5TEZ5 329 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CTAGE6Q86UF2 777 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CTAGE4Q8IX94 777 aa10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
COL6A6-201ENST00000358511 CNNM3Q8NE01 707 aa10.1□□□□□ -0.79
COL6A6-201ENST00000358511 GTF3C6Q969F1 213 aa10.1□□□□□ -0.79
COL6A6-201ENST00000358511 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
COL6A6-201ENST00000358511 SARNPP82979 210 aaKnown RBP10.1□□□□□ -0.79
COL6A6-201ENST00000358511 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
COL6A6-201ENST00000358511 FCHSD2O94868 740 aa10.1□□□□□ -0.79
COL6A6-201ENST00000358511 B4GALNT4Q76KP1 1039 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms