RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 PDZRN3Q9UPQ7 1066 aa27.77■■■□□ 2.04
POLR2J2-202ENST00000358438 SLC39A6Q13433 755 aa27.76■■■□□ 2.03
POLR2J2-202ENST00000358438 SMC5Q8IY18 1101 aa27.76■■■□□ 2.03
POLR2J2-202ENST00000358438 HSP90AA1P07900 732 aaKnown RBP27.76■■■□□ 2.03
POLR2J2-202ENST00000358438 PHAXQ9H814 394 aaKnown RBP27.76■■■□□ 2.03
POLR2J2-202ENST00000358438 N4BP2Q86UW6 1770 aaPredicted RBP27.75■■■□□ 2.03
POLR2J2-202ENST00000358438 ISY1Q9ULR0 285 aaKnown RBP27.74■■■□□ 2.03
POLR2J2-202ENST00000358438 XRCC6P12956 609 aaKnown RBP eCLIP27.74■■■□□ 2.03
POLR2J2-202ENST00000358438 CABP4P57796 275 aa27.74■■■□□ 2.03
POLR2J2-202ENST00000358438 JCADQ9P266 1359 aa27.74■■■□□ 2.03
POLR2J2-202ENST00000358438 PXDNLA1KZ92 1463 aa27.74■■■□□ 2.03
POLR2J2-202ENST00000358438 DBF4Q9UBU7 674 aaPredicted RBP27.73■■■□□ 2.03
POLR2J2-202ENST00000358438 PRAMEF22A3QJZ6 481 aa27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 HSP90AA2PQ14568 343 aaPredicted RBP27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 NKX1-1Q15270 411 aaPredicted RBP27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 UPF2Q9HAU5 1272 aaKnown RBP27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 PLCH1Q4KWH8 1693 aa27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 SIRT2Q8IXJ6 389 aa27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 NAP1L5Q96NT1 182 aaPredicted RBP27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 MEIS3Q99687 375 aa27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 C5P01031 1676 aa27.72■■■□□ 2.03
POLR2J2-202ENST00000358438 ADAMTS2O95450 1211 aa27.71■■■□□ 2.03
POLR2J2-202ENST00000358438 DDX54Q8TDD1 881 aaKnown RBP27.71■■■□□ 2.03
POLR2J2-202ENST00000358438 TTC5Q8N0Z6 440 aa27.7■■■□□ 2.02
POLR2J2-202ENST00000358438 ATP10DQ9P241 1426 aa27.69■■■□□ 2.02
POLR2J2-202ENST00000358438 ZNF496Q96IT1 587 aaPredicted RBP27.69■■■□□ 2.02
POLR2J2-202ENST00000358438 ERVV-2B6SEH9 535 aa27.68■■■□□ 2.02
POLR2J2-202ENST00000358438 ANXA1P04083 346 aa27.68■■■□□ 2.02
POLR2J2-202ENST00000358438 MRE11P49959 708 aa27.68■■■□□ 2.02
POLR2J2-202ENST00000358438 TBC1D32Q96NH3 1257 aa27.68■■■□□ 2.02
POLR2J2-202ENST00000358438 SLKQ9H2G2 1235 aaPredicted RBP27.68■■■□□ 2.02
POLR2J2-202ENST00000358438 DISP2A7MBM2 1401 aa27.67■■■□□ 2.02
POLR2J2-202ENST00000358438 GCC1Q96CN9 775 aa27.67■■■□□ 2.02
POLR2J2-202ENST00000358438 MCM4P33991 863 aa27.65■■■□□ 2.02
POLR2J2-202ENST00000358438 PROSER3Q2NL68 480 aa27.65■■■□□ 2.02
POLR2J2-202ENST00000358438 RPAP2Q8IXW5 612 aaPredicted RBP27.65■■■□□ 2.02
POLR2J2-202ENST00000358438 ANKRD44Q8N8A2 993 aa27.65■■■□□ 2.02
POLR2J2-202ENST00000358438 FMNL2Q96PY5 1086 aa27.65■■■□□ 2.02
POLR2J2-202ENST00000358438 NRAPQ86VF7 1730 aa27.65■■■□□ 2.02
POLR2J2-202ENST00000358438 NUCB1Q02818 461 aa27.64■■■□□ 2.02
POLR2J2-202ENST00000358438 CEP85Q6P2H3 762 aa27.64■■■□□ 2.01
POLR2J2-202ENST00000358438 HYPKQ9NX55 129 aa27.64■■■□□ 2.01
POLR2J2-202ENST00000358438 WNK3Q9BYP7 1800 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 SEC24BO95487 1268 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 SNRPA1P09661 255 aaKnown RBP27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 ZMYND15Q9H091 742 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 DDX21Q9NR30 783 aaKnown RBP eCLIP27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 TOGARAM1Q9Y4F4 1720 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 GLI3P10071 1580 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 PI4KAP2A4QPH2 592 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 VSIG10Q8N0Z9 540 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 PI4KAP1Q8N8J0 262 aa27.63■■■□□ 2.01
POLR2J2-202ENST00000358438 ADCY9O60503 1353 aa27.62■■■□□ 2.01
POLR2J2-202ENST00000358438 UBR2Q8IWV8 1755 aa27.62■■■□□ 2.01
POLR2J2-202ENST00000358438 PAPPAQ13219 1627 aa27.62■■■□□ 2.01
POLR2J2-202ENST00000358438 GNAI3P08754 354 aa27.61■■■□□ 2.01
POLR2J2-202ENST00000358438 DNAAF4Q8WXU2 420 aa27.61■■■□□ 2.01
POLR2J2-202ENST00000358438 TBC1D2Q9BYX2 928 aa27.61■■■□□ 2.01
POLR2J2-202ENST00000358438 PDIA6Q15084 440 aa27.61■■■□□ 2.01
POLR2J2-202ENST00000358438 GNAI2P04899 355 aa27.6■■■□□ 2.01
POLR2J2-202ENST00000358438 CHD1LQ86WJ1 897 aa27.6■■■□□ 2.01
POLR2J2-202ENST00000358438 SRCIN1Q9C0H9 1055 aa27.6■■■□□ 2.01
POLR2J2-202ENST00000358438 SPATA31A6Q5VVP1 1343 aa27.59■■■□□ 2.01
POLR2J2-202ENST00000358438 LAMB4A4D0S4 1761 aa27.59■■■□□ 2.01
POLR2J2-202ENST00000358438 NWD2Q9ULI1 1742 aa27.59■■■□□ 2.01
POLR2J2-202ENST00000358438 CHMP5Q9NZZ3 219 aa27.58■■■□□ 2.01
POLR2J2-202ENST00000358438 LRP6O75581 1613 aa27.58■■■□□ 2.01
POLR2J2-202ENST00000358438 USP44Q9H0E7 712 aa27.58■■■□□ 2.01
POLR2J2-202ENST00000358438 DCTPP1Q9H773 170 aa27.58■■■□□ 2.01
POLR2J2-202ENST00000358438 USP16Q9Y5T5 823 aa27.58■■■□□ 2.01
POLR2J2-202ENST00000358438 BEND3Q5T5X7 828 aa27.57■■■□□ 2
POLR2J2-202ENST00000358438 ANKRD45Q5TZF3 282 aa27.56■■■□□ 2
POLR2J2-202ENST00000358438 KSR2Q6VAB6 950 aa27.56■■■□□ 2
POLR2J2-202ENST00000358438 LNPKQ9C0E8 428 aa27.56■■■□□ 2
POLR2J2-202ENST00000358438 KCPQ6ZWJ8 1503 aa27.56■■■□□ 2
POLR2J2-202ENST00000358438 C8orf37Q96NL8 207 aa27.56■■■□□ 2
POLR2J2-202ENST00000358438 SPATA31A1Q5TZJ5 1347 aa27.55■■■□□ 2
POLR2J2-202ENST00000358438 MAP3K2Q9Y2U5 619 aa27.55■■■□□ 2
POLR2J2-202ENST00000358438 SLIT2O94813 1529 aa27.55■■■□□ 2
POLR2J2-202ENST00000358438 TPM2P07951 284 aa27.54■■■□□ 2
POLR2J2-202ENST00000358438 MEX3CQ5U5Q3 659 aaKnown RBP27.54■■■□□ 2
POLR2J2-202ENST00000358438 TMOD3Q9NYL9 352 aa27.54■■■□□ 2
POLR2J2-202ENST00000358438 TNS2Q63HR2 1409 aa27.54■■■□□ 2
POLR2J2-202ENST00000358438 DDX11L8A8MPP1 907 aa27.53■■■□□ 2
POLR2J2-202ENST00000358438 EXOC5O00471 708 aa27.53■■■□□ 2
POLR2J2-202ENST00000358438 HMMRO75330 724 aa27.53■■■□□ 2
POLR2J2-202ENST00000358438 DDX58O95786 925 aaKnown RBP27.53■■■□□ 2
POLR2J2-202ENST00000358438 THRAP3Q9Y2W1 955 aaKnown RBP27.53■■■□□ 2
POLR2J2-202ENST00000358438 TRAK2O60296 914 aa27.53■■■□□ 2
POLR2J2-202ENST00000358438 UBTFL1P0CB47 393 aaPredicted RBP27.53■■■□□ 2
POLR2J2-202ENST00000358438 MYL6BP14649 208 aa27.53■■■□□ 2
POLR2J2-202ENST00000358438 CDCA7Q9BWT1 371 aaPredicted RBP27.52■■■□□ 2
POLR2J2-202ENST00000358438 ITGB4P16144 1822 aa27.52■■■□□ 2
POLR2J2-202ENST00000358438 ESPNB1AK53 854 aa27.52■■■□□ 2
POLR2J2-202ENST00000358438 AIMP1Q12904 312 aaKnown RBP27.52■■■□□ 2
POLR2J2-202ENST00000358438 PANK2Q9BZ23 570 aa27.51■■□□□ 1.99
POLR2J2-202ENST00000358438 LRP10Q7Z4F1 713 aa27.5■■□□□ 1.99
POLR2J2-202ENST00000358438 NGLY1Q96IV0 654 aa27.5■■□□□ 1.99
POLR2J2-202ENST00000358438 LRRFIP2Q9Y608 721 aaKnown RBP27.5■■□□□ 1.99
POLR2J2-202ENST00000358438 ILDR1Q86SU0 546 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms