RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
SMARCAL1-202ENST00000358207 SLFN14P0C7P3 912 aa11.45□□□□□ -0.58
SMARCAL1-202ENST00000358207 NME9Q86XW9 330 aa11.45□□□□□ -0.58
SMARCAL1-202ENST00000358207 KCNH5Q8NCM2 988 aa11.45□□□□□ -0.58
SMARCAL1-202ENST00000358207 DOT1LQ8TEK3 1739 aa11.45□□□□□ -0.58
SMARCAL1-202ENST00000358207 TAF1LQ8IZX4 1826 aa11.45□□□□□ -0.58
SMARCAL1-202ENST00000358207 CLGNO14967 610 aa11.44□□□□□ -0.58
SMARCAL1-202ENST00000358207 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
SMARCAL1-202ENST00000358207 WDR17Q8IZU2 1322 aa11.44□□□□□ -0.58
SMARCAL1-202ENST00000358207 TCP11L2Q8N4U5 519 aa11.44□□□□□ -0.58
SMARCAL1-202ENST00000358207 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
SMARCAL1-202ENST00000358207 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
SMARCAL1-202ENST00000358207 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 RGPD2P0DJD1 1756 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 MCM5P33992 734 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 PDCL2Q8N4E4 241 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 TIGD1Q96MW7 591 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 RBSNQ9H1K0 784 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 PRDM11Q9NQV5 511 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 APAF1O14727 1248 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 FYB1O15117 783 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 HDGFL2Q7Z4V5 671 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 ARHGEF25Q86VW2 580 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 TERF2IPQ9NYB0 399 aa11.43□□□□□ -0.58
SMARCAL1-202ENST00000358207 RRS1Q15050 365 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 EP400NLQ6ZTU2 488 aa11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 PLSCR1O15162 318 aa11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 GCP02774 474 aa11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 APPP05067 770 aa11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 GEMIN8Q9NWZ8 242 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-202ENST00000358207 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 CARD10Q9BWT7 1032 aa11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 YY1AP1Q9H869 796 aa11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 HMGN5P82970 282 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 C5P01031 1676 aa11.41□□□□□ -0.58
SMARCAL1-202ENST00000358207 PRIMPOLQ96LW4 560 aa11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 NSD2O96028 1365 aa11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 IBTKQ9P2D0 1353 aaPredicted RBP11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 FAM193AP78312 1265 aa11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 TMED8Q6PL24 325 aaPredicted RBP11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 KIF3AQ9Y496 699 aa11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
SMARCAL1-202ENST00000358207 EMILIN1Q9Y6C2 1016 aa11.39□□□□□ -0.59
SMARCAL1-202ENST00000358207 RBM25P49756 843 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-202ENST00000358207 GABPB1Q06547 395 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-202ENST00000358207 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-202ENST00000358207 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-202ENST00000358207 ANKRD36BQ8N2N9 1353 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 ITGB4P16144 1822 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 CCDC66A2RUB6 948 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 GBP4Q96PP9 640 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 KIF13BQ9NQT8 1826 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 HMOX1P09601 288 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 ZNF445P59923 1031 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 ANKRD7Q92527 254 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 FEZ2Q9UHY8 353 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 MAPK8IP3Q9UPT6 1336 aa11.38□□□□□ -0.59
SMARCAL1-202ENST00000358207 OGFRQ9NZT2 677 aa11.37□□□□□ -0.59
SMARCAL1-202ENST00000358207 ADAMTS7Q9UKP4 1686 aa11.37□□□□□ -0.59
SMARCAL1-202ENST00000358207 CHD4Q14839 1912 aa11.37□□□□□ -0.59
SMARCAL1-202ENST00000358207 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
SMARCAL1-202ENST00000358207 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
SMARCAL1-202ENST00000358207 PATL2C9JE40 543 aaKnown RBP11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 KLHL40Q2TBA0 621 aa11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 ZNF622Q969S3 477 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 FEZ1Q99689 392 aa11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 KIAA2012Q0VF49 1180 aa11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 TERF2Q15554 542 aa11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 HOMEZQ8IX15 550 aa11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 DDX49Q9Y6V7 483 aaKnown RBP11.36□□□□□ -0.59
SMARCAL1-202ENST00000358207 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-202ENST00000358207 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-202ENST00000358207 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-202ENST00000358207 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-202ENST00000358207 C22orf23Q9BZE7 217 aa11.35□□□□□ -0.59
SMARCAL1-202ENST00000358207 ZSCAN23Q3MJ62 389 aa11.34□□□□□ -0.59
SMARCAL1-202ENST00000358207 ERICH4A6NGS2 130 aa11.34□□□□□ -0.59
SMARCAL1-202ENST00000358207 AXDND1Q5T1B0 1012 aaPredicted RBP11.34□□□□□ -0.59
SMARCAL1-202ENST00000358207 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 SMC5Q8IY18 1101 aa11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 ERBB3P21860 1342 aa11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 DEFB132Q7Z7B7 95 aa11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms