RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 TNNT3P45378 269 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 MINDY4BA8MYZ0 360 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 TRPM2O94759 1503 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 ABCC1P33527 1531 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 CHRNA2Q15822 529 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 SPATA32Q96LK8 384 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 F6X3S4 739 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 IQCA1Q86XH1 822 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 GPTP24298 496 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
SPTAN1-201ENST00000358161 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 SERPINC1P01008 464 aa12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 PUS7Q96PZ0 661 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 C19orf44Q9H6X5 657 aa12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 LDHCP07864 332 aa12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-201ENST00000358161 CFAP74Q9C0B2 1584 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 ZNF213O14771 459 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 CBFA2T2O43439 604 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 SMARCA5O60264 1052 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
SPTAN1-201ENST00000358161 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 BAG3O95817 575 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 AKAP4Q5JQC9 854 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 TRIM27P14373 513 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 FAM43AQ8N2R8 423 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 MAST1Q9Y2H9 1570 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
SPTAN1-201ENST00000358161 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 CUL5Q93034 780 aa12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 TRIM21P19474 475 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 ERCC4Q92889 916 aaPredicted RBP12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 SLC12A7Q9Y666 1083 aa12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 ATP10AO60312 1499 aa12.1□□□□□ -0.47
SPTAN1-201ENST00000358161 FLT4P35916 1363 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 DDB1Q16531 1140 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 GSTO1P78417 241 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 ZFYVE9O95405 1425 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 HSP90B2PQ58FF3 399 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 IL2RBP14784 551 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 SETDB2Q96T68 719 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
SPTAN1-201ENST00000358161 NPATQ14207 1427 aa12.08□□□□□ -0.47
SPTAN1-201ENST00000358161 RAB34Q9BZG1 259 aa12.08□□□□□ -0.47
SPTAN1-201ENST00000358161 DNAI2Q9GZS0 605 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 DESP17661 470 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 FAM83GA6ND36 823 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 ZNF622Q969S3 477 aaKnown RBP eCLIP12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 SMTNL1A8MU46 457 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 HLA-DOAP06340 250 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 HMGN5P82970 282 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms