RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 KIF1CO43896 1103 aaKnown RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SLC12A5Q9H2X9 1139 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 CCDC61Q9Y6R9 512 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 CCDC38Q502W7 563 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SHTN1A0MZ66 631 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 PHF23Q9BUL5 403 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SAMD9Q5K651 1589 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 RTEL1-TNFRSF6BF6WH68 1400 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 EFCAB8A8MWE9 144 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 BRD1O95696 1058 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 AEBP2Q6ZN18 517 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 P3H4Q92791 437 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 PTPRKQ15262 1439 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SARM1Q6SZW1 724 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 MORC2Q9Y6X9 1032 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SPAG1Q07617 926 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 REREQ9P2R6 1566 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 ESYT1Q9BSJ8 1104 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 GORABQ5T7V8 394 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 ARHGAP25P42331 645 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 STIM1Q13586 685 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SSR1P43307 286 aaKnown RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 STAP2Q9UGK3 403 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 PLCD4Q9BRC7 762 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 STMN4Q9H169 189 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 EZRP15311 586 aaKnown RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 SDSP20132 328 aa4.78□□□□□ -1.65
SYNE2-204ENST00000358025 NT5C2P49902 561 aa4.78□□□□□ -1.65
SYNE2-204ENST00000358025 CCAR2Q8N163 923 aaKnown RBP4.78□□□□□ -1.65
SYNE2-204ENST00000358025 CEP120Q8N960 986 aa4.78□□□□□ -1.65
SYNE2-204ENST00000358025 RABGGTAQ92696 567 aa4.78□□□□□ -1.65
SYNE2-204ENST00000358025 PCF11O94913 1555 aaKnown RBP4.78□□□□□ -1.65
SYNE2-204ENST00000358025 TTC21BQ7Z4L5 1316 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 EBAG9O00559 213 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 AMPHP49418 695 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 PLEKHM2Q8IWE5 1019 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 USP48Q86UV5 1035 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SPC24Q8NBT2 197 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 ANKRD18BA2A2Z9 1011 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 GBP2P32456 591 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 TRAK1Q9UPV9 953 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 NBPF11Q86T75 865 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 GOLGA5Q8TBA6 731 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 DUOX2Q9NRD8 1548 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 CBX1P83916 185 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 MLKLQ8NB16 471 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 POLR1AO95602 1720 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 MYO1AQ9UBC5 1043 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 CLIP2Q9UDT6 1046 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 KIAA0232Q92628 1395 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 ARHGAP31Q2M1Z3 1444 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SSFA2P28290 1259 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 TXLNAP40222 546 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 ME1P48163 572 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 ETF1P62495 437 aaKnown RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 ANKS4BQ8N8V4 417 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 NOC3LQ8WTT2 800 aaKnown RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 TRIM14Q14142 442 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 NUTM2DQ5VT03 806 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 ARMC9Q7Z3E5 817 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 NUTM2AQ8IVF1 878 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 USO1O60763 962 aaKnown RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 BCL2L13Q9BXK5 485 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 KCND1Q9NSA2 647 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC102BQ68D86 513 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 EXOC4Q96A65 974 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SERPINC1P01008 464 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 PDE1AP54750 535 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SLC4A10Q6U841 1118 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
SYNE2-204ENST00000358025 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
SYNE2-204ENST00000358025 SURF6O75683 361 aaKnown RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 APBA1Q02410 837 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 RRP7AQ9Y3A4 280 aaKnown RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 COL17A1Q9UMD9 1497 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ZNF622Q969S3 477 aaKnown RBP eCLIP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 PDRG1Q9NUG6 133 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 RBSNQ9H1K0 784 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ZFYVE9O95405 1425 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 TTC41PQ6P2S7 1318 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 BRAPQ7Z569 592 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 SNW1Q13573 536 aaKnown RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 SIRT1Q96EB6 747 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 YY1AP1Q9H869 796 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 LIG1P18858 919 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 PSD3Q9NYI0 1048 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 EID1Q9Y6B2 187 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ZFYP08048 801 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 RALYLQ86SE5 291 aaKnown RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 FMNL2Q96PY5 1086 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 TAF7Q15545 349 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 IPO4Q8TEX9 1081 aaKnown RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 MYCBPQ99417 103 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 RAD54L2Q9Y4B4 1467 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 YEATS4O95619 227 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms