RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PHRF1Q9P1Y6 1649 aaKnown RBP12.94□□□□□ -0.34
CAPN3-205ENST00000357568 SYCE3A1L190 88 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-205ENST00000357568 GGNBP2Q9H3C7 697 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 PKP1Q13835 747 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
CAPN3-205ENST00000357568 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
CAPN3-205ENST00000357568 ABTB2Q8N961 1025 aa12.92□□□□□ -0.34
CAPN3-205ENST00000357568 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
CAPN3-205ENST00000357568 SDSP20132 328 aa12.92□□□□□ -0.34
CAPN3-205ENST00000357568 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
CAPN3-205ENST00000357568 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
CAPN3-205ENST00000357568 RTL1A6NKG5 1358 aa12.91□□□□□ -0.34
CAPN3-205ENST00000357568 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-205ENST00000357568 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN3-205ENST00000357568 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
CAPN3-205ENST00000357568 TPM3P06753 285 aa12.91□□□□□ -0.34
CAPN3-205ENST00000357568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN3-205ENST00000357568 PTMAP06454 111 aaKnown RBP12.9□□□□□ -0.34
CAPN3-205ENST00000357568 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
CAPN3-205ENST00000357568 RGS12O14924 1447 aa12.9□□□□□ -0.34
CAPN3-205ENST00000357568 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
CAPN3-205ENST00000357568 NME9Q86XW9 330 aa12.9□□□□□ -0.34
CAPN3-205ENST00000357568 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
CAPN3-205ENST00000357568 KIF20AO95235 890 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 MCCP23508 829 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 NLRP6P59044 892 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 COG3Q96JB2 828 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 PTPRCP08575 1304 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
CAPN3-205ENST00000357568 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-205ENST00000357568 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
CAPN3-205ENST00000357568 ABCC6O95255 1503 aa12.88□□□□□ -0.35
CAPN3-205ENST00000357568 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-205ENST00000357568 NFAT5O94916 1531 aa12.88□□□□□ -0.35
CAPN3-205ENST00000357568 HMMRO75330 724 aa12.87□□□□□ -0.35
CAPN3-205ENST00000357568 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
CAPN3-205ENST00000357568 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
CAPN3-205ENST00000357568 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
CAPN3-205ENST00000357568 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
CAPN3-205ENST00000357568 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
CAPN3-205ENST00000357568 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
CAPN3-205ENST00000357568 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
CAPN3-205ENST00000357568 KIF3AQ9Y496 699 aa12.86□□□□□ -0.35
CAPN3-205ENST00000357568 CPDO75976 1380 aa12.86□□□□□ -0.35
CAPN3-205ENST00000357568 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
CAPN3-205ENST00000357568 IL13P35225 146 aa12.85□□□□□ -0.35
CAPN3-205ENST00000357568 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CAPN3-205ENST00000357568 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
CAPN3-205ENST00000357568 COL14A1Q05707 1796 aaKnown RBP12.85□□□□□ -0.35
CAPN3-205ENST00000357568 SYCP1Q15431 976 aa12.85□□□□□ -0.35
CAPN3-205ENST00000357568 AOX1Q06278 1338 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 GCP02774 474 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 NEK4P51957 841 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 RPAP1Q9BWH6 1393 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-205ENST00000357568 LTN1O94822 1766 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 SALL3Q9BXA9 1300 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
CAPN3-205ENST00000357568 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-205ENST00000357568 ESYT1Q9BSJ8 1104 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
CAPN3-205ENST00000357568 DNTTIP2Q5QJE6 756 aaKnown RBP12.83□□□□□ -0.36
CAPN3-205ENST00000357568 TAF3Q5VWG9 929 aa12.83□□□□□ -0.36
CAPN3-205ENST00000357568 MX1P20591 662 aa12.83□□□□□ -0.36
CAPN3-205ENST00000357568 PDE1AP54750 535 aa12.83□□□□□ -0.36
CAPN3-205ENST00000357568 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
CAPN3-205ENST00000357568 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
CAPN3-205ENST00000357568 RNF214Q8ND24 703 aa12.83□□□□□ -0.36
CAPN3-205ENST00000357568 COL18A1P39060 1754 aa12.82□□□□□ -0.36
CAPN3-205ENST00000357568 ANKRD7Q92527 254 aa12.82□□□□□ -0.36
CAPN3-205ENST00000357568 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
CAPN3-205ENST00000357568 LRP6O75581 1613 aa12.82□□□□□ -0.36
CAPN3-205ENST00000357568 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-205ENST00000357568 FEZ1Q99689 392 aa12.82□□□□□ -0.36
CAPN3-205ENST00000357568 LMO7Q8WWI1 1683 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 KDM4AO75164 1064 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 UBE2HP62256 183 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 CTIFO43310 598 aaKnown RBP12.81□□□□□ -0.36
CAPN3-205ENST00000357568 ADCY5O95622 1261 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 CHAF1AQ13111 956 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-205ENST00000357568 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
CAPN3-205ENST00000357568 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
CAPN3-205ENST00000357568 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
CAPN3-205ENST00000357568 ATP6V1DQ9Y5K8 247 aa12.8□□□□□ -0.36
CAPN3-205ENST00000357568 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
CAPN3-205ENST00000357568 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-205ENST00000357568 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
CAPN3-205ENST00000357568 KIAA1524Q8TCG1 905 aa12.8□□□□□ -0.36
CAPN3-205ENST00000357568 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms