RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 FOXD4L5Q5VV16 416 aaPredicted RBP10.28□□□□□ -0.76
GM2A-201ENST00000357164 MPNDQ8N594 471 aa10.28□□□□□ -0.76
GM2A-201ENST00000357164 FOXD4L4Q8WXT5 416 aaPredicted RBP10.28□□□□□ -0.76
GM2A-201ENST00000357164 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.76
GM2A-201ENST00000357164 FBXO38Q6PIJ6 1188 aa10.27□□□□□ -0.76
GM2A-201ENST00000357164 HSPA4P34932 840 aa10.27□□□□□ -0.77
GM2A-201ENST00000357164 CRB1P82279 1406 aa10.27□□□□□ -0.77
GM2A-201ENST00000357164 RPAP2Q8IXW5 612 aaPredicted RBP10.27□□□□□ -0.77
GM2A-201ENST00000357164 RGS22Q8NE09 1264 aa10.27□□□□□ -0.77
GM2A-201ENST00000357164 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
GM2A-201ENST00000357164 PHACTR3Q96KR7 559 aa10.27□□□□□ -0.77
GM2A-201ENST00000357164 ST7Q9NRC1 585 aa10.27□□□□□ -0.77
GM2A-201ENST00000357164 CNPY2Q9Y2B0 182 aa10.27□□□□□ -0.77
GM2A-201ENST00000357164 ELP1O95163 1332 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 NPM3O75607 178 aaKnown RBP10.26□□□□□ -0.77
GM2A-201ENST00000357164 REC8O95072 547 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 FOXD4L6Q3SYB3 417 aaPredicted RBP10.26□□□□□ -0.77
GM2A-201ENST00000357164 FOXD4L3Q6VB84 417 aaPredicted RBP10.26□□□□□ -0.77
GM2A-201ENST00000357164 C8orf58Q8NAV2 365 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 TIGD1Q96MW7 591 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 PLA2G4AP47712 749 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 PDE1AP54750 535 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 ZNF397Q8NF99 534 aaPredicted RBP10.26□□□□□ -0.77
GM2A-201ENST00000357164 GDPD2Q9HCC8 539 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 WDR33Q9C0J8 1336 aaKnown RBP10.26□□□□□ -0.77
GM2A-201ENST00000357164 CCDC144BQ3MJ40 725 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 SARM1Q6SZW1 724 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 KRT222Q8N1A0 295 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
GM2A-201ENST00000357164 APBB1O00213 710 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 ZSCAN22P10073 491 aaPredicted RBP10.25□□□□□ -0.77
GM2A-201ENST00000357164 PTGS1P23219 599 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 LRMPQ12912 555 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 JCADQ9P266 1359 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 FANCGO15287 622 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 CHMLP26374 656 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 CCZ1BP86790 482 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 CCZ1P86791 482 aaPredicted RBP10.25□□□□□ -0.77
GM2A-201ENST00000357164 NRBP1Q9UHY1 535 aa10.25□□□□□ -0.77
GM2A-201ENST00000357164 USP27XA6NNY8 438 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 KCNJ4P48050 445 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 NFE2L2Q16236 605 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 AOX1Q06278 1338 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 CACTINQ8WUQ7 758 aaKnown RBP10.24□□□□□ -0.77
GM2A-201ENST00000357164 TEX2Q8IWB9 1127 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 IQUBQ8NA54 791 aa10.24□□□□□ -0.77
GM2A-201ENST00000357164 SOX12O15370 315 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 F13A1P00488 732 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 IL13P35225 146 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 PSEN1P49768 467 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 RAD51AP2Q09MP3 1159 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 KRT24Q2M2I5 525 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 ZNF75DP51815 510 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 NEK4P51957 841 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 HNRNPH2P55795 449 aaKnown RBP10.23□□□□□ -0.77
GM2A-201ENST00000357164 IQCB1Q15051 598 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 RUFY3Q7L099 469 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 MTMR6Q9Y217 621 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 FAM200AQ8TCP9 573 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 CPS1P31327 1500 aa10.23□□□□□ -0.77
GM2A-201ENST00000357164 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 SYT1P21579 422 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 CCDC66A2RUB6 948 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 MAPK8IP2Q13387 824 aaPredicted RBP10.22□□□□□ -0.77
GM2A-201ENST00000357164 GIMAP6Q6P9H5 292 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
GM2A-201ENST00000357164 EFCC1Q9HA90 598 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 GEMIN8Q9NWZ8 242 aaKnown RBP10.22□□□□□ -0.77
GM2A-201ENST00000357164 REXO1L1PQ8IX06 675 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 LRRN4CLQ8ND94 238 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 PRAM1Q96QH2 718 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 ZNF215Q9UL58 517 aaPredicted RBP10.22□□□□□ -0.77
GM2A-201ENST00000357164 MRC1P22897 1456 aa10.22□□□□□ -0.77
GM2A-201ENST00000357164 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
GM2A-201ENST00000357164 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.77
GM2A-201ENST00000357164 CALCOCO1Q9P1Z2 691 aa10.21□□□□□ -0.77
GM2A-201ENST00000357164 POLKQ9UBT6 870 aa10.21□□□□□ -0.77
GM2A-201ENST00000357164 NEDD4P46934 1319 aa10.21□□□□□ -0.77
GM2A-201ENST00000357164 EVC2Q86UK5 1308 aa10.21□□□□□ -0.77
GM2A-201ENST00000357164 PPP4R3CPQ6ZMV5 832 aa10.21□□□□□ -0.78
GM2A-201ENST00000357164 ZNF771Q7L3S4 317 aaPredicted RBP10.21□□□□□ -0.78
GM2A-201ENST00000357164 UNC5CLQ8IV45 518 aa10.21□□□□□ -0.78
GM2A-201ENST00000357164 LRRC8AQ8IWT6 810 aa10.21□□□□□ -0.78
GM2A-201ENST00000357164 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.21□□□□□ -0.78
GM2A-201ENST00000357164 USP42Q9H9J4 1324 aaKnown RBP10.21□□□□□ -0.78
GM2A-201ENST00000357164 KCNJ6P48051 423 aa10.21□□□□□ -0.78
GM2A-201ENST00000357164 ERO1AQ96HE7 468 aa10.21□□□□□ -0.78
GM2A-201ENST00000357164 SNRKQ9NRH2 765 aa10.21□□□□□ -0.78
GM2A-201ENST00000357164 LARGE1O95461 756 aa10.2□□□□□ -0.78
GM2A-201ENST00000357164 LSG1Q9H089 658 aaKnown RBP10.2□□□□□ -0.78
GM2A-201ENST00000357164 CBX8Q9HC52 389 aa10.2□□□□□ -0.78
GM2A-201ENST00000357164 TSPYL1Q9H0U9 437 aa10.2□□□□□ -0.78
GM2A-201ENST00000357164 HYPKQ9NX55 129 aa10.2□□□□□ -0.78
GM2A-201ENST00000357164 RICTORQ6R327 1708 aa10.2□□□□□ -0.78
GM2A-201ENST00000357164 NBPF11Q86T75 865 aa10.2□□□□□ -0.78
GM2A-201ENST00000357164 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms