RNA–Protein interactions for RNA: ENST00000356208.9

RBM38-203, Transcript of RNA binding motif protein 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM38, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-203ENST00000356208 NPM2Q86SE8 214 aaKnown RBP27.12■■□□□ 1.93
RBM38-203ENST00000356208 HYPKQ9NX55 129 aa27.12■■□□□ 1.93
RBM38-203ENST00000356208 DISP2A7MBM2 1401 aa27.11■■□□□ 1.93
RBM38-203ENST00000356208 SNRPA1P09661 255 aaKnown RBP27.11■■□□□ 1.93
RBM38-203ENST00000356208 SRCIN1Q9C0H9 1055 aa27.11■■□□□ 1.93
RBM38-203ENST00000356208 USP44Q9H0E7 712 aa27.11■■□□□ 1.93
RBM38-203ENST00000356208 UBAP1LF5GYI3 381 aa27.1■■□□□ 1.93
RBM38-203ENST00000356208 USP16Q9Y5T5 823 aa27.1■■□□□ 1.93
RBM38-203ENST00000356208 ANP32AP39687 249 aaKnown RBP27.09■■□□□ 1.93
RBM38-203ENST00000356208 BEND3Q5T5X7 828 aa27.09■■□□□ 1.93
RBM38-203ENST00000356208 NUTM2BA6NNL0 878 aaPredicted RBP27.09■■□□□ 1.93
RBM38-203ENST00000356208 NUTM2EB1AL46 878 aaPredicted RBP27.09■■□□□ 1.93
RBM38-203ENST00000356208 NUTM2AQ8IVF1 878 aaPredicted RBP27.09■■□□□ 1.93
RBM38-203ENST00000356208 UBR2Q8IWV8 1755 aa27.09■■□□□ 1.93
RBM38-203ENST00000356208 PAPPAQ13219 1627 aa27.08■■□□□ 1.93
RBM38-203ENST00000356208 MAP3K2Q9Y2U5 619 aa27.08■■□□□ 1.93
RBM38-203ENST00000356208 NRAPQ86VF7 1730 aa27.08■■□□□ 1.93
RBM38-203ENST00000356208 WNK3Q9BYP7 1800 aa27.07■■□□□ 1.92
RBM38-203ENST00000356208 LAMB4A4D0S4 1761 aa27.07■■□□□ 1.92
RBM38-203ENST00000356208 KSR2Q6VAB6 950 aa27.07■■□□□ 1.92
RBM38-203ENST00000356208 MYL6BP14649 208 aa27.06■■□□□ 1.92
RBM38-203ENST00000356208 AIMP1Q12904 312 aaKnown RBP27.06■■□□□ 1.92
RBM38-203ENST00000356208 LRRFIP2Q9Y608 721 aaKnown RBP27.06■■□□□ 1.92
RBM38-203ENST00000356208 UBTFL1P0CB47 393 aaPredicted RBP27.05■■□□□ 1.92
RBM38-203ENST00000356208 HMMRO75330 724 aa27.05■■□□□ 1.92
RBM38-203ENST00000356208 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
RBM38-203ENST00000356208 KCPQ6ZWJ8 1503 aa27.04■■□□□ 1.92
RBM38-203ENST00000356208 PIP4K2AP48426 406 aaPredicted RBP27.03■■□□□ 1.92
RBM38-203ENST00000356208 DDX58O95786 925 aaKnown RBP27.02■■□□□ 1.92
RBM38-203ENST00000356208 NBPF7P0C2Y1 421 aaPredicted RBP27.02■■□□□ 1.92
RBM38-203ENST00000356208 PNMA6EA0A0J9YXQ4 647 aa27.01■■□□□ 1.92
RBM38-203ENST00000356208 LRP10Q7Z4F1 713 aa27.01■■□□□ 1.92
RBM38-203ENST00000356208 XAGE3Q8WTP9 111 aa27.01■■□□□ 1.91
RBM38-203ENST00000356208 TMOD3Q9NYL9 352 aa27.01■■□□□ 1.91
RBM38-203ENST00000356208 SEC24BO95487 1268 aa27■■□□□ 1.91
RBM38-203ENST00000356208 ITGB4P16144 1822 aa27■■□□□ 1.91
RBM38-203ENST00000356208 TNS2Q63HR2 1409 aa27■■□□□ 1.91
RBM38-203ENST00000356208 APBB1O00213 710 aa27■■□□□ 1.91
RBM38-203ENST00000356208 PTCD1O75127 700 aaKnown RBP27■■□□□ 1.91
RBM38-203ENST00000356208 ATP8B2P98198 1209 aa27■■□□□ 1.91
RBM38-203ENST00000356208 COPS6Q7L5N1 327 aa27■■□□□ 1.91
RBM38-203ENST00000356208 SPATA31A1Q5TZJ5 1347 aa26.99■■□□□ 1.91
RBM38-203ENST00000356208 CWF19L2Q2TBE0 894 aaKnown RBP26.99■■□□□ 1.91
RBM38-203ENST00000356208 NWD2Q9ULI1 1742 aa26.98■■□□□ 1.91
RBM38-203ENST00000356208 EXOC5O00471 708 aa26.98■■□□□ 1.91
RBM38-203ENST00000356208 ALDH1L1O75891 902 aa26.98■■□□□ 1.91
RBM38-203ENST00000356208 RIC3Q7Z5B4 369 aa26.97■■□□□ 1.91
RBM38-203ENST00000356208 SLIT2O94813 1529 aa26.96■■□□□ 1.91
RBM38-203ENST00000356208 SMARCA5O60264 1052 aaPredicted RBP26.96■■□□□ 1.91
RBM38-203ENST00000356208 PIGBQ92521 554 aa26.96■■□□□ 1.91
RBM38-203ENST00000356208 IPO9Q96P70 1041 aaKnown RBP26.96■■□□□ 1.91
RBM38-203ENST00000356208 ZBTB47Q9UFB7 747 aaPredicted RBP26.96■■□□□ 1.91
RBM38-203ENST00000356208 EXOC6BQ9Y2D4 811 aa26.96■■□□□ 1.91
RBM38-203ENST00000356208 KAT6BQ8WYB5 2073 aa26.96■■□□□ 1.91
RBM38-203ENST00000356208 LINS1Q8NG48 757 aa26.95■■□□□ 1.91
RBM38-203ENST00000356208 C16orf71Q8IYS4 520 aaPredicted RBP26.95■■□□□ 1.9
RBM38-203ENST00000356208 C9orf78Q9NZ63 289 aaPredicted RBP26.93■■□□□ 1.9
RBM38-203ENST00000356208 ASAP1Q9ULH1 1129 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 THRAP3Q9Y2W1 955 aaKnown RBP26.93■■□□□ 1.9
RBM38-203ENST00000356208 LRP6O75581 1613 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 NBPF26B4DH59 902 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 BMP2KLQ5H9B9 411 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 NBPF14Q5TI25 921 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 NBPF10Q6P3W6 841 aaKnown RBP26.93■■□□□ 1.9
RBM38-203ENST00000356208 ANKRD13DQ6ZTN6 518 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 PLEKHM2Q8IWE5 1019 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 NBPF15Q8N660 670 aa26.93■■□□□ 1.9
RBM38-203ENST00000356208 PPP1R42Q7Z4L9 355 aa26.92■■□□□ 1.9
RBM38-203ENST00000356208 SPATA31A5Q5VU36 1347 aa26.92■■□□□ 1.9
RBM38-203ENST00000356208 SPATA31A7Q8IWB4 1347 aa26.92■■□□□ 1.9
RBM38-203ENST00000356208 IGKV5-2P06315 115 aa26.92■■□□□ 1.9
RBM38-203ENST00000356208 SSH3Q8TE77 659 aa26.92■■□□□ 1.9
RBM38-203ENST00000356208 CDCA7Q9BWT1 371 aaPredicted RBP26.92■■□□□ 1.9
RBM38-203ENST00000356208 ARFGEF2Q9Y6D5 1785 aa26.92■■□□□ 1.9
RBM38-203ENST00000356208 ERBB4Q15303 1308 aa26.91■■□□□ 1.9
RBM38-203ENST00000356208 OTUD7AQ8TE49 926 aaPredicted RBP26.91■■□□□ 1.9
RBM38-203ENST00000356208 JCADQ9P266 1359 aa26.91■■□□□ 1.9
RBM38-203ENST00000356208 METTL22Q9BUU2 404 aaPredicted RBP26.9■■□□□ 1.9
RBM38-203ENST00000356208 ATG3Q9NT62 314 aa26.9■■□□□ 1.9
RBM38-203ENST00000356208 CCDC9Q9Y3X0 531 aaKnown RBP26.9■■□□□ 1.9
RBM38-203ENST00000356208 A1BGP04217 495 aa26.9■■□□□ 1.9
RBM38-203ENST00000356208 NEXNQ0ZGT2 675 aa26.9■■□□□ 1.9
RBM38-203ENST00000356208 BCL9O00512 1426 aa26.89■■□□□ 1.9
RBM38-203ENST00000356208 DOT1LQ8TEK3 1739 aa26.89■■□□□ 1.9
RBM38-203ENST00000356208 MYD88Q99836 296 aa26.89■■□□□ 1.9
RBM38-203ENST00000356208 IBTKQ9P2D0 1353 aaPredicted RBP26.89■■□□□ 1.89
RBM38-203ENST00000356208 GRM8O00222 908 aa26.89■■□□□ 1.89
RBM38-203ENST00000356208 SRGAP3O43295 1099 aa26.89■■□□□ 1.89
RBM38-203ENST00000356208 POLA2Q14181 598 aa26.89■■□□□ 1.89
RBM38-203ENST00000356208 DDB1Q16531 1140 aa26.89■■□□□ 1.89
RBM38-203ENST00000356208 NEURL1BA8MQ27 555 aa26.87■■□□□ 1.89
RBM38-203ENST00000356208 SYTL4Q96C24 671 aaPredicted RBP26.87■■□□□ 1.89
RBM38-203ENST00000356208 C8orf37Q96NL8 207 aa26.86■■□□□ 1.89
RBM38-203ENST00000356208 UTYO14607 1347 aa26.86■■□□□ 1.89
RBM38-203ENST00000356208 AFDNP55196 1824 aaKnown RBP26.86■■□□□ 1.89
RBM38-203ENST00000356208 LRRCC1Q9C099 1032 aa26.86■■□□□ 1.89
RBM38-203ENST00000356208 GSPT1P15170 499 aaKnown RBP26.85■■□□□ 1.89
RBM38-203ENST00000356208 ERICH6Q7L0X2 663 aa26.85■■□□□ 1.89
RBM38-203ENST00000356208 PLBD2Q8NHP8 589 aa26.85■■□□□ 1.89
RBM38-203ENST00000356208 UNC5CLQ8IV45 518 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms