RNA–Protein interactions for RNA: ENST00000356200.7

CDK11A-201, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5 BASIC

Gene CDK11A, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-201ENST00000356200 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
CDK11A-201ENST00000356200 ANP32AP39687 249 aaKnown RBP18.17■□□□□ 0.5
CDK11A-201ENST00000356200 KCNQ4P56696 695 aa18.17■□□□□ 0.5
CDK11A-201ENST00000356200 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
CDK11A-201ENST00000356200 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
CDK11A-201ENST00000356200 CT47B1P0C2W7 299 aaPredicted RBP18.16■□□□□ 0.5
CDK11A-201ENST00000356200 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
CDK11A-201ENST00000356200 RGPD3A6NKT7 1758 aaPredicted RBP18.16■□□□□ 0.5
CDK11A-201ENST00000356200 RGPD4Q7Z3J3 1758 aa18.16■□□□□ 0.5
CDK11A-201ENST00000356200 ANXA1P04083 346 aa18.16■□□□□ 0.5
CDK11A-201ENST00000356200 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
CDK11A-201ENST00000356200 CCDC125Q86Z20 511 aa18.16■□□□□ 0.5
CDK11A-201ENST00000356200 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
CDK11A-201ENST00000356200 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
CDK11A-201ENST00000356200 LY75O60449 1722 aa18.14■□□□□ 0.49
CDK11A-201ENST00000356200 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
CDK11A-201ENST00000356200 PALLDQ8WX93 1383 aa18.14■□□□□ 0.49
CDK11A-201ENST00000356200 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.49
CDK11A-201ENST00000356200 MRPL50Q8N5N7 158 aaKnown RBP18.14■□□□□ 0.49
CDK11A-201ENST00000356200 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
CDK11A-201ENST00000356200 ZNF831Q5JPB2 1677 aa18.13■□□□□ 0.49
CDK11A-201ENST00000356200 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
CDK11A-201ENST00000356200 G2E3Q7L622 706 aa18.13■□□□□ 0.49
CDK11A-201ENST00000356200 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
CDK11A-201ENST00000356200 PROSER3Q2NL68 480 aa18.12■□□□□ 0.49
CDK11A-201ENST00000356200 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
CDK11A-201ENST00000356200 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
CDK11A-201ENST00000356200 NOB1Q9ULX3 412 aaKnown RBP18.12■□□□□ 0.49
CDK11A-201ENST00000356200 LOC102724428A0A0B4J2F2 783 aa18.11■□□□□ 0.49
CDK11A-201ENST00000356200 SIK1P57059 783 aa18.11■□□□□ 0.49
CDK11A-201ENST00000356200 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
CDK11A-201ENST00000356200 CICQ96RK0 1608 aaPredicted RBP18.11■□□□□ 0.49
CDK11A-201ENST00000356200 PLSCR1O15162 318 aa18.11■□□□□ 0.49
CDK11A-201ENST00000356200 HOXB7P09629 217 aa18.11■□□□□ 0.49
CDK11A-201ENST00000356200 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
CDK11A-201ENST00000356200 A1BGP04217 495 aa18.1■□□□□ 0.49
CDK11A-201ENST00000356200 ATP6V1AP38606 617 aa18.1■□□□□ 0.49
CDK11A-201ENST00000356200 ITPK1Q13572 414 aa18.1■□□□□ 0.49
CDK11A-201ENST00000356200 RNF123Q5XPI4 1314 aa18.1■□□□□ 0.49
CDK11A-201ENST00000356200 APBA3O96018 575 aa18.1■□□□□ 0.49
CDK11A-201ENST00000356200 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
CDK11A-201ENST00000356200 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
CDK11A-201ENST00000356200 TJP1Q07157 1748 aa18.09■□□□□ 0.49
CDK11A-201ENST00000356200 MYL6BP14649 208 aa18.09■□□□□ 0.49
CDK11A-201ENST00000356200 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDK11A-201ENST00000356200 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
CDK11A-201ENST00000356200 PDIA6Q15084 440 aa18.09■□□□□ 0.49
CDK11A-201ENST00000356200 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
CDK11A-201ENST00000356200 LAMB4A4D0S4 1761 aa18.08■□□□□ 0.49
CDK11A-201ENST00000356200 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.48
CDK11A-201ENST00000356200 CLUAP1Q96AJ1 413 aa18.08■□□□□ 0.48
CDK11A-201ENST00000356200 NBPF26B4DH59 902 aa18.07■□□□□ 0.48
CDK11A-201ENST00000356200 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
CDK11A-201ENST00000356200 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
CDK11A-201ENST00000356200 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
CDK11A-201ENST00000356200 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
CDK11A-201ENST00000356200 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
CDK11A-201ENST00000356200 CYP19A1P11511 503 aaPredicted RBP18.06■□□□□ 0.48
CDK11A-201ENST00000356200 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
CDK11A-201ENST00000356200 BAG6P46379 1132 aa18.06■□□□□ 0.48
CDK11A-201ENST00000356200 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
CDK11A-201ENST00000356200 RREB1Q92766 1687 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 MYH14Q7Z406 1995 aaKnown RBP18.05■□□□□ 0.48
CDK11A-201ENST00000356200 RLBP1P12271 317 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 TRIM27P14373 513 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 AIMP1Q12904 312 aaKnown RBP18.05■□□□□ 0.48
CDK11A-201ENST00000356200 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 LINC00116Q8NCU8 138 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
CDK11A-201ENST00000356200 CCNL1Q9UK58 526 aaPredicted RBP18.05■□□□□ 0.48
CDK11A-201ENST00000356200 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
CDK11A-201ENST00000356200 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDK11A-201ENST00000356200 TAF1LQ8IZX4 1826 aa18.04■□□□□ 0.48
CDK11A-201ENST00000356200 FLIIQ13045 1269 aa18.04■□□□□ 0.48
CDK11A-201ENST00000356200 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
CDK11A-201ENST00000356200 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
CDK11A-201ENST00000356200 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
CDK11A-201ENST00000356200 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
CDK11A-201ENST00000356200 F6X3S4 739 aa18.03■□□□□ 0.48
CDK11A-201ENST00000356200 STARD3NLO95772 234 aa18.03■□□□□ 0.48
CDK11A-201ENST00000356200 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
CDK11A-201ENST00000356200 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
CDK11A-201ENST00000356200 PROM2Q8N271 834 aa18.03■□□□□ 0.48
CDK11A-201ENST00000356200 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
CDK11A-201ENST00000356200 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
CDK11A-201ENST00000356200 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
CDK11A-201ENST00000356200 CRKLP46109 303 aaKnown RBP18.02■□□□□ 0.48
CDK11A-201ENST00000356200 ATF7IPQ6VMQ6 1270 aa18.02■□□□□ 0.48
CDK11A-201ENST00000356200 FKBP5Q13451 457 aaPredicted RBP18.02■□□□□ 0.47
CDK11A-201ENST00000356200 TXNRD1Q16881 649 aa18.02■□□□□ 0.47
CDK11A-201ENST00000356200 INTS5Q6P9B9 1019 aaKnown RBP18.02■□□□□ 0.47
CDK11A-201ENST00000356200 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.47
CDK11A-201ENST00000356200 EN1Q05925 392 aaPredicted RBP18.01■□□□□ 0.47
CDK11A-201ENST00000356200 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
CDK11A-201ENST00000356200 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
CDK11A-201ENST00000356200 HYPKQ9NX55 129 aa18■□□□□ 0.47
CDK11A-201ENST00000356200 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
CDK11A-201ENST00000356200 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 683.4 ms