RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MAP4K4O95819 1239 aaPredicted RBP21.89■■□□□ 1.1
NPAS3-202ENST00000356141 ZCRB1Q8TBF4 217 aaKnown RBP21.88■■□□□ 1.09
NPAS3-202ENST00000356141 C22orf23Q9BZE7 217 aa21.88■■□□□ 1.09
NPAS3-202ENST00000356141 PPP1R42Q7Z4L9 355 aa21.88■■□□□ 1.09
NPAS3-202ENST00000356141 TBC1D9Q6ZT07 1266 aa21.88■■□□□ 1.09
NPAS3-202ENST00000356141 SYTL4Q96C24 671 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-202ENST00000356141 C9orf78Q9NZ63 289 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-202ENST00000356141 WDR17Q8IZU2 1322 aa21.88■■□□□ 1.09
NPAS3-202ENST00000356141 ADCY9O60503 1353 aa21.88■■□□□ 1.09
NPAS3-202ENST00000356141 SRGAP3O43295 1099 aa21.87■■□□□ 1.09
NPAS3-202ENST00000356141 NUTM1Q86Y26 1132 aa21.87■■□□□ 1.09
NPAS3-202ENST00000356141 XAGE3Q8WTP9 111 aa21.87■■□□□ 1.09
NPAS3-202ENST00000356141 FAM208AQ9UK61 1670 aaKnown RBP21.87■■□□□ 1.09
NPAS3-202ENST00000356141 BEND3Q5T5X7 828 aa21.87■■□□□ 1.09
NPAS3-202ENST00000356141 COPS6Q7L5N1 327 aa21.87■■□□□ 1.09
NPAS3-202ENST00000356141 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
NPAS3-202ENST00000356141 ATP5J2-PTCD1G3V325 749 aa21.86■■□□□ 1.09
NPAS3-202ENST00000356141 GNAI3P08754 354 aa21.86■■□□□ 1.09
NPAS3-202ENST00000356141 PA2G4Q9UQ80 394 aaKnown RBP21.86■■□□□ 1.09
NPAS3-202ENST00000356141 HMMRO75330 724 aa21.86■■□□□ 1.09
NPAS3-202ENST00000356141 SURF6O75683 361 aaKnown RBP21.86■■□□□ 1.09
NPAS3-202ENST00000356141 TBC1D32Q96NH3 1257 aa21.86■■□□□ 1.09
NPAS3-202ENST00000356141 NCOA3Q9Y6Q9 1424 aa21.85■■□□□ 1.09
NPAS3-202ENST00000356141 PDIA4P13667 645 aaKnown RBP21.84■■□□□ 1.09
NPAS3-202ENST00000356141 DCAF5Q96JK2 942 aa21.84■■□□□ 1.09
NPAS3-202ENST00000356141 BABAM1Q9NWV8 329 aa21.84■■□□□ 1.09
NPAS3-202ENST00000356141 KLHDC4Q8TBB5 520 aa21.84■■□□□ 1.09
NPAS3-202ENST00000356141 IL2RBP14784 551 aa21.84■■□□□ 1.09
NPAS3-202ENST00000356141 PDIA6Q15084 440 aa21.84■■□□□ 1.09
NPAS3-202ENST00000356141 MYD88Q99836 296 aa21.83■■□□□ 1.09
NPAS3-202ENST00000356141 RBM42Q9BTD8 480 aaKnown RBP21.83■■□□□ 1.09
NPAS3-202ENST00000356141 FOXD4L1Q9NU39 408 aa21.83■■□□□ 1.09
NPAS3-202ENST00000356141 LMO7Q8WWI1 1683 aa21.83■■□□□ 1.09
NPAS3-202ENST00000356141 SIL1Q9H173 461 aa21.83■■□□□ 1.08
NPAS3-202ENST00000356141 COL18A1P39060 1754 aa21.82■■□□□ 1.08
NPAS3-202ENST00000356141 OS9Q13438 667 aaPredicted RBP21.82■■□□□ 1.08
NPAS3-202ENST00000356141 BMP2KLQ5H9B9 411 aa21.82■■□□□ 1.08
NPAS3-202ENST00000356141 VIRMAQ69YN4 1812 aaKnown RBP21.82■■□□□ 1.08
NPAS3-202ENST00000356141 A1BGP04217 495 aa21.82■■□□□ 1.08
NPAS3-202ENST00000356141 ATP8B2P98198 1209 aa21.82■■□□□ 1.08
NPAS3-202ENST00000356141 RILPL2Q969X0 211 aa21.82■■□□□ 1.08
NPAS3-202ENST00000356141 NCAPD2Q15021 1401 aa21.81■■□□□ 1.08
NPAS3-202ENST00000356141 SOS1Q07889 1333 aaPredicted RBP21.81■■□□□ 1.08
NPAS3-202ENST00000356141 SDSP20132 328 aa21.81■■□□□ 1.08
NPAS3-202ENST00000356141 TTC22Q5TAA0 569 aa21.8■■□□□ 1.08
NPAS3-202ENST00000356141 COL5A2P05997 1499 aaPredicted RBP21.8■■□□□ 1.08
NPAS3-202ENST00000356141 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
NPAS3-202ENST00000356141 LRRCC1Q9C099 1032 aa21.8■■□□□ 1.08
NPAS3-202ENST00000356141 CCDC9Q9Y3X0 531 aaKnown RBP21.8■■□□□ 1.08
NPAS3-202ENST00000356141 KSR2Q6VAB6 950 aa21.79■■□□□ 1.08
NPAS3-202ENST00000356141 CPDO75976 1380 aa21.79■■□□□ 1.08
NPAS3-202ENST00000356141 KDM3BQ7LBC6 1761 aa21.79■■□□□ 1.08
NPAS3-202ENST00000356141 TBC1D2Q9BYX2 928 aa21.79■■□□□ 1.08
NPAS3-202ENST00000356141 DDX21Q9NR30 783 aaKnown RBP eCLIP21.79■■□□□ 1.08
NPAS3-202ENST00000356141 FMNL2Q96PY5 1086 aa21.78■■□□□ 1.08
NPAS3-202ENST00000356141 SNRPA1P09661 255 aaKnown RBP21.77■■□□□ 1.08
NPAS3-202ENST00000356141 ZBTB3Q9H5J0 574 aa21.77■■□□□ 1.08
NPAS3-202ENST00000356141 SUCLG2Q96I99 432 aa21.77■■□□□ 1.08
NPAS3-202ENST00000356141 IGKV5-2P06315 115 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 HOXB7P09629 217 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 HYPKQ9NX55 129 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 ASAP1Q9ULH1 1129 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 PDE1AP54750 535 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 TTLL7Q6ZT98 887 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 UNC5CLQ8IV45 518 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-202ENST00000356141 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
NPAS3-202ENST00000356141 CARD10Q9BWT7 1032 aa21.75■■□□□ 1.07
NPAS3-202ENST00000356141 BICC1Q9H694 974 aaKnown RBP21.75■■□□□ 1.07
NPAS3-202ENST00000356141 CDC45O75419 566 aa21.75■■□□□ 1.07
NPAS3-202ENST00000356141 IL27Q8NEV9 243 aa21.74■■□□□ 1.07
NPAS3-202ENST00000356141 CHMP3Q9Y3E7 222 aa21.74■■□□□ 1.07
NPAS3-202ENST00000356141 ANKRD13DQ6ZTN6 518 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.73■■□□□ 1.07
NPAS3-202ENST00000356141 OVOS2A0A0G2JMS6 1433 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 NBPF26B4DH59 902 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 EPHA10Q5JZY3 1008 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 NBPF14Q5TI25 921 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 NBPF10Q6P3W6 841 aaKnown RBP21.73■■□□□ 1.07
NPAS3-202ENST00000356141 NBPF15Q8N660 670 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 ACSBG1Q96GR2 724 aa21.73■■□□□ 1.07
NPAS3-202ENST00000356141 CCDC85AQ96PX6 553 aaPredicted RBP21.73■■□□□ 1.07
NPAS3-202ENST00000356141 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
NPAS3-202ENST00000356141 MX1P20591 662 aa21.72■■□□□ 1.07
NPAS3-202ENST00000356141 UBE3BQ7Z3V4 1068 aa21.72■■□□□ 1.07
NPAS3-202ENST00000356141 HEG1Q9ULI3 1381 aa21.72■■□□□ 1.07
NPAS3-202ENST00000356141 CD2BP2O95400 341 aaKnown RBP21.72■■□□□ 1.07
NPAS3-202ENST00000356141 CRYBG1Q9Y4K1 1723 aa21.71■■□□□ 1.07
NPAS3-202ENST00000356141 GRM8O00222 908 aa21.71■■□□□ 1.07
NPAS3-202ENST00000356141 PDE4CQ08493 712 aa21.71■■□□□ 1.07
NPAS3-202ENST00000356141 TMOD3Q9NYL9 352 aa21.71■■□□□ 1.07
NPAS3-202ENST00000356141 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.07
NPAS3-202ENST00000356141 KAZALD1Q96I82 304 aa21.7■■□□□ 1.07
NPAS3-202ENST00000356141 C5P01031 1676 aa21.7■■□□□ 1.06
NPAS3-202ENST00000356141 BECN1Q14457 450 aa21.7■■□□□ 1.06
NPAS3-202ENST00000356141 RHPN1Q8TCX5 695 aa21.7■■□□□ 1.06
NPAS3-202ENST00000356141 NEXNQ0ZGT2 675 aa21.7■■□□□ 1.06
NPAS3-202ENST00000356141 SSH3Q8TE77 659 aa21.7■■□□□ 1.06
NPAS3-202ENST00000356141 GOLGB1Q14789 3259 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms