RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 CUL4AQ13619 759 aa16.03■□□□□ 0.16
NCDN-201ENST00000356090 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
NCDN-201ENST00000356090 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
NCDN-201ENST00000356090 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.03■□□□□ 0.16
NCDN-201ENST00000356090 ANAPC15P60006 121 aa16.03■□□□□ 0.16
NCDN-201ENST00000356090 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
NCDN-201ENST00000356090 USP44Q9H0E7 712 aa16.03■□□□□ 0.16
NCDN-201ENST00000356090 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
NCDN-201ENST00000356090 MCM5P33992 734 aa16.02■□□□□ 0.16
NCDN-201ENST00000356090 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
NCDN-201ENST00000356090 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
NCDN-201ENST00000356090 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.15
NCDN-201ENST00000356090 FAM173BQ6P4H8 233 aa16.02■□□□□ 0.15
NCDN-201ENST00000356090 STK3Q13188 491 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 NOLC1Q14978 699 aaKnown RBP eCLIP16.01■□□□□ 0.15
NCDN-201ENST00000356090 C9orf78Q9NZ63 289 aaPredicted RBP16.01■□□□□ 0.15
NCDN-201ENST00000356090 TAOK2Q9UL54 1235 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 DYNC1I1O14576 645 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
NCDN-201ENST00000356090 GJB2P29033 226 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
NCDN-201ENST00000356090 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
NCDN-201ENST00000356090 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 SNX14Q9Y5W7 946 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 FOSBP53539 338 aa16.01■□□□□ 0.15
NCDN-201ENST00000356090 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
NCDN-201ENST00000356090 PI4KAP2A4QPH2 592 aa16■□□□□ 0.15
NCDN-201ENST00000356090 PI4KAP1Q8N8J0 262 aa16■□□□□ 0.15
NCDN-201ENST00000356090 PDRG1Q9NUG6 133 aa16■□□□□ 0.15
NCDN-201ENST00000356090 DIP2CQ9Y2E4 1556 aa16■□□□□ 0.15
NCDN-201ENST00000356090 SOS1Q07889 1333 aaPredicted RBP15.99■□□□□ 0.15
NCDN-201ENST00000356090 HSPA4P34932 840 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 CBX1P83916 185 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 CKAP2LQ8IYA6 745 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
NCDN-201ENST00000356090 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
NCDN-201ENST00000356090 LARGE1O95461 756 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 FAM184AQ8NB25 1140 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 SIL1Q9H173 461 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 PA2G4Q9UQ80 394 aaKnown RBP15.99■□□□□ 0.15
NCDN-201ENST00000356090 F13A1P00488 732 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 UBE2HP62256 183 aa15.99■□□□□ 0.15
NCDN-201ENST00000356090 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
NCDN-201ENST00000356090 TFIP11Q9UBB9 837 aaKnown RBP15.99■□□□□ 0.15
NCDN-201ENST00000356090 PDE4CQ08493 712 aa15.98■□□□□ 0.15
NCDN-201ENST00000356090 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
NCDN-201ENST00000356090 ZKSCAN1P17029 563 aaPredicted RBP15.98■□□□□ 0.15
NCDN-201ENST00000356090 RUFY3Q7L099 469 aa15.98■□□□□ 0.15
NCDN-201ENST00000356090 ZHX1Q9UKY1 873 aaPredicted RBP15.98■□□□□ 0.15
NCDN-201ENST00000356090 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 SGSM2O43147 1006 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 TEFQ10587 303 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 LARP1BQ659C4 914 aaKnown RBP15.97■□□□□ 0.15
NCDN-201ENST00000356090 CHPF2Q9P2E5 772 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 FGD1P98174 961 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 ANKRD26Q9UPS8 1709 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 IL17REQ8NFR9 667 aa15.97■□□□□ 0.15
NCDN-201ENST00000356090 TERF1P54274 439 aa15.96■□□□□ 0.15
NCDN-201ENST00000356090 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
NCDN-201ENST00000356090 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
NCDN-201ENST00000356090 DLG5Q8TDM6 1919 aa15.96■□□□□ 0.15
NCDN-201ENST00000356090 ADCK5Q3MIX3 580 aa15.96■□□□□ 0.15
NCDN-201ENST00000356090 AACSQ86V21 672 aa15.96■□□□□ 0.15
NCDN-201ENST00000356090 FBXW7Q969H0 707 aa15.96■□□□□ 0.15
NCDN-201ENST00000356090 NEO1Q92859 1461 aa15.96■□□□□ 0.15
NCDN-201ENST00000356090 CCDC8Q9H0W5 538 aaPredicted RBP15.96■□□□□ 0.14
NCDN-201ENST00000356090 RAD50Q92878 1312 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 ROBO2Q9HCK4 1378 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 CEBPAP49715 358 aaPredicted RBP15.95■□□□□ 0.14
NCDN-201ENST00000356090 PTH1RQ03431 593 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 CRB1P82279 1406 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 RAB11FIP3O75154 756 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
NCDN-201ENST00000356090 BICD2Q8TD16 824 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 ZNF592Q92610 1267 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 GPATCH3Q96I76 525 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 KIF3AQ9Y496 699 aa15.95■□□□□ 0.14
NCDN-201ENST00000356090 PPFIA3O75145 1194 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 KDM4AO75164 1064 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 STAP2Q9UGK3 403 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 GOLGA6L6A8MZA4 724 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 CCDC192P0DO97 292 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 HSP90B1P14625 803 aaKnown RBP15.94■□□□□ 0.14
NCDN-201ENST00000356090 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
NCDN-201ENST00000356090 LETM1O95202 739 aaPredicted RBP15.93■□□□□ 0.14
NCDN-201ENST00000356090 HMGN5P82970 282 aaKnown RBP15.93■□□□□ 0.14
NCDN-201ENST00000356090 MTERF4Q7Z6M4 381 aaKnown RBP15.93■□□□□ 0.14
NCDN-201ENST00000356090 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 REREQ9P2R6 1566 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 KCNQ3O43525 872 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms