RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PRAM1Q96QH2 718 aa19.96■□□□□ 0.79
COL27A1-201ENST00000356083 ZNF644Q9H582 1327 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-201ENST00000356083 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
COL27A1-201ENST00000356083 ZBTB9Q96C00 473 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 EHMT1Q9H9B1 1298 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 KIF5CO60282 957 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 ACTN2P35609 894 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 CETN1Q12798 172 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 NGLY1Q96IV0 654 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 FAM107BQ9H098 131 aa19.95■□□□□ 0.78
COL27A1-201ENST00000356083 FGFR1OPO95684 399 aaKnown RBP19.94■□□□□ 0.78
COL27A1-201ENST00000356083 RAB34Q9BZG1 259 aa19.94■□□□□ 0.78
COL27A1-201ENST00000356083 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
COL27A1-201ENST00000356083 GPATCH11Q8N954 259 aa19.94■□□□□ 0.78
COL27A1-201ENST00000356083 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
COL27A1-201ENST00000356083 CCDC63Q8NA47 563 aa19.94■□□□□ 0.78
COL27A1-201ENST00000356083 CNTLNQ9NXG0 1405 aa19.94■□□□□ 0.78
COL27A1-201ENST00000356083 SLU7O95391 586 aaKnown RBP19.94■□□□□ 0.78
COL27A1-201ENST00000356083 BOLA2Q9H3K6 86 aa19.94■□□□□ 0.78
COL27A1-201ENST00000356083 BIRC2Q13490 618 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 MYO1BO43795 1136 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 IQCA1Q86XH1 822 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 PRKRIP1Q9H875 184 aaPredicted RBP19.93■□□□□ 0.78
COL27A1-201ENST00000356083 URI1O94763 535 aaPredicted RBP19.93■□□□□ 0.78
COL27A1-201ENST00000356083 MTIF2P46199 727 aaKnown RBP19.93■□□□□ 0.78
COL27A1-201ENST00000356083 PAFAH1B1P43034 410 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 MAP9Q49MG5 647 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 ZNF710Q8N1W2 664 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 FERMT3Q86UX7 667 aa19.93■□□□□ 0.78
COL27A1-201ENST00000356083 TTC36A6NLP5 189 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 BAG4O95429 457 aaKnown RBP19.92■□□□□ 0.78
COL27A1-201ENST00000356083 PHACTR2O75167 634 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 ATP2C2O75185 946 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 NUTM1Q86Y26 1132 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 CTCFLQ8NI51 663 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-201ENST00000356083 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 PDZRN3Q9UPQ7 1066 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 CCT4P50991 539 aaKnown RBP19.92■□□□□ 0.78
COL27A1-201ENST00000356083 AKNAD1Q5T1N1 836 aa19.92■□□□□ 0.78
COL27A1-201ENST00000356083 TRMT1Q9NXH9 659 aaKnown RBP19.92■□□□□ 0.78
COL27A1-201ENST00000356083 SRCIN1Q9C0H9 1055 aa19.91■□□□□ 0.78
COL27A1-201ENST00000356083 GJC1P36383 396 aa19.91■□□□□ 0.78
COL27A1-201ENST00000356083 CCDC174Q6PII3 467 aa19.91■□□□□ 0.78
COL27A1-201ENST00000356083 IDEP14735 1019 aa19.91■□□□□ 0.78
COL27A1-201ENST00000356083 GPTP24298 496 aa19.91■□□□□ 0.78
COL27A1-201ENST00000356083 LARP6Q9BRS8 491 aaKnown RBP19.91■□□□□ 0.78
COL27A1-201ENST00000356083 GON4LQ3T8J9 2241 aa19.91■□□□□ 0.78
COL27A1-201ENST00000356083 EP400NLQ6ZTU2 488 aa19.9■□□□□ 0.78
COL27A1-201ENST00000356083 CCT2P78371 535 aaKnown RBP19.9■□□□□ 0.78
COL27A1-201ENST00000356083 TCP11L2Q8N4U5 519 aa19.9■□□□□ 0.78
COL27A1-201ENST00000356083 LRRC45Q96CN5 670 aa19.9■□□□□ 0.78
COL27A1-201ENST00000356083 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-201ENST00000356083 WIZO95785 1651 aa19.9■□□□□ 0.78
COL27A1-201ENST00000356083 F8W031 263 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-201ENST00000356083 IFIT1P09914 478 aaKnown RBP19.9■□□□□ 0.78
COL27A1-201ENST00000356083 SMC1BQ8NDV3 1235 aa19.9■□□□□ 0.78
COL27A1-201ENST00000356083 CIZ1Q9ULV3 898 aaPredicted RBP19.89■□□□□ 0.78
COL27A1-201ENST00000356083 MAATS1Q7Z4T9 603 aa19.89■□□□□ 0.78
COL27A1-201ENST00000356083 SREK1Q8WXA9 508 aaKnown RBP19.89■□□□□ 0.78
COL27A1-201ENST00000356083 HAUS7Q99871 368 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 PANK2Q9BZ23 570 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 SLC12A7Q9Y666 1083 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 TMEM110-MUSTN1A8MSY1 372 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 USO1O60763 962 aaKnown RBP19.89■□□□□ 0.77
COL27A1-201ENST00000356083 CCDC83Q8IWF9 413 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 MPHOSPH6Q99547 160 aaKnown RBP19.89■□□□□ 0.77
COL27A1-201ENST00000356083 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 ATXN8OSP0DMR3 200 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 CCDC40Q4G0X9 1142 aa19.89■□□□□ 0.77
COL27A1-201ENST00000356083 TPD52P55327 224 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-201ENST00000356083 MAP7D1Q3KQU3 841 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 STX6O43752 255 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 PRDM10Q9NQV6 1147 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 PPFIA3O75145 1194 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 TOP1P11387 765 aaKnown RBP19.88■□□□□ 0.77
COL27A1-201ENST00000356083 FBF1Q8TES7 1133 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 CALML4Q96GE6 196 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 ALS2CR12Q96Q35 445 aa19.88■□□□□ 0.77
COL27A1-201ENST00000356083 SATB1Q01826 763 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 SSRP1Q08945 709 aaKnown RBP19.87■□□□□ 0.77
COL27A1-201ENST00000356083 DAAM2Q86T65 1068 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 CATIPQ7Z7H3 387 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 USHBP1Q8N6Y0 703 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 CCDC194A0A1B0GVG4 234 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 IFIT3O14879 490 aaKnown RBP19.87■□□□□ 0.77
COL27A1-201ENST00000356083 MAP3K11Q16584 847 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 RBM26Q5T8P6 1007 aaKnown RBP19.87■□□□□ 0.77
COL27A1-201ENST00000356083 CNNM3Q8NE01 707 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 MYD88Q99836 296 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 C8orf76Q96K31 380 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
COL27A1-201ENST00000356083 ZNF213O14771 459 aa19.86■□□□□ 0.77
COL27A1-201ENST00000356083 JADE2Q9NQC1 790 aa19.86■□□□□ 0.77
COL27A1-201ENST00000356083 PTPN14Q15678 1187 aa19.86■□□□□ 0.77
COL27A1-201ENST00000356083 CCDC6Q16204 474 aa19.86■□□□□ 0.77
COL27A1-201ENST00000356083 RRBP1Q9P2E9 1410 aaKnown RBP19.86■□□□□ 0.77
COL27A1-201ENST00000356083 A0A087WZG4 1122 aa19.86■□□□□ 0.77
COL27A1-201ENST00000356083 C6orf163Q5TEZ5 329 aa19.86■□□□□ 0.77
COL27A1-201ENST00000356083 SNX16P57768 344 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms