RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 GNAI3P08754 354 aa28.67■■■□□ 2.18
SCAMP3-202ENST00000355379 BACH2Q9BYV9 841 aa28.67■■■□□ 2.18
SCAMP3-202ENST00000355379 KCPQ6ZWJ8 1503 aa28.67■■■□□ 2.18
SCAMP3-202ENST00000355379 TNS2Q63HR2 1409 aa28.67■■■□□ 2.18
SCAMP3-202ENST00000355379 PDIA6Q15084 440 aa28.66■■■□□ 2.18
SCAMP3-202ENST00000355379 EXOC5O00471 708 aa28.65■■■□□ 2.18
SCAMP3-202ENST00000355379 DNAAF4Q8WXU2 420 aa28.65■■■□□ 2.18
SCAMP3-202ENST00000355379 NUCB1Q02818 461 aa28.64■■■□□ 2.18
SCAMP3-202ENST00000355379 CEP85Q6P2H3 762 aa28.64■■■□□ 2.18
SCAMP3-202ENST00000355379 ADCY9O60503 1353 aa28.64■■■□□ 2.18
SCAMP3-202ENST00000355379 ANXA1P04083 346 aa28.64■■■□□ 2.17
SCAMP3-202ENST00000355379 SPATA31A5Q5VU36 1347 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 SPATA31A7Q8IWB4 1347 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 PI4KAP2A4QPH2 592 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 GNAI2P04899 355 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 PROSER3Q2NL68 480 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 KSR2Q6VAB6 950 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 PI4KAP1Q8N8J0 262 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 SRCIN1Q9C0H9 1055 aa28.63■■■□□ 2.17
SCAMP3-202ENST00000355379 DDX58O95786 925 aaKnown RBP28.62■■■□□ 2.17
SCAMP3-202ENST00000355379 ERBB4Q15303 1308 aa28.62■■■□□ 2.17
SCAMP3-202ENST00000355379 BEND3Q5T5X7 828 aa28.61■■■□□ 2.17
SCAMP3-202ENST00000355379 TMOD3Q9NYL9 352 aa28.61■■■□□ 2.17
SCAMP3-202ENST00000355379 FAM161AQ3B820 660 aa28.6■■■□□ 2.17
SCAMP3-202ENST00000355379 DCTPP1Q9H773 170 aa28.6■■■□□ 2.17
SCAMP3-202ENST00000355379 USP16Q9Y5T5 823 aa28.6■■■□□ 2.17
SCAMP3-202ENST00000355379 BARGINQ6ZT62 677 aa28.59■■■□□ 2.17
SCAMP3-202ENST00000355379 SPATA31A6Q5VVP1 1343 aa28.59■■■□□ 2.17
SCAMP3-202ENST00000355379 USP44Q9H0E7 712 aa28.59■■■□□ 2.17
SCAMP3-202ENST00000355379 IBTKQ9P2D0 1353 aaPredicted RBP28.58■■■□□ 2.17
SCAMP3-202ENST00000355379 HMMRO75330 724 aa28.58■■■□□ 2.17
SCAMP3-202ENST00000355379 CHD1LQ86WJ1 897 aa28.58■■■□□ 2.17
SCAMP3-202ENST00000355379 ALDH1L1O75891 902 aa28.57■■■□□ 2.16
SCAMP3-202ENST00000355379 MAP3K2Q9Y2U5 619 aa28.57■■■□□ 2.16
SCAMP3-202ENST00000355379 LRP10Q7Z4F1 713 aa28.56■■■□□ 2.16
SCAMP3-202ENST00000355379 UNC5CLQ8IV45 518 aa28.56■■■□□ 2.16
SCAMP3-202ENST00000355379 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.56■■■□□ 2.16
SCAMP3-202ENST00000355379 UBTFL1P0CB47 393 aaPredicted RBP28.54■■■□□ 2.16
SCAMP3-202ENST00000355379 DOT1LQ8TEK3 1739 aa28.54■■■□□ 2.16
SCAMP3-202ENST00000355379 C8orf34Q49A92 452 aa28.53■■■□□ 2.16
SCAMP3-202ENST00000355379 PIGBQ92521 554 aa28.53■■■□□ 2.16
SCAMP3-202ENST00000355379 BCL9O00512 1426 aa28.53■■■□□ 2.16
SCAMP3-202ENST00000355379 DDB1Q16531 1140 aa28.53■■■□□ 2.16
SCAMP3-202ENST00000355379 ANKRD45Q5TZF3 282 aa28.53■■■□□ 2.16
SCAMP3-202ENST00000355379 VSIG10Q8N0Z9 540 aa28.53■■■□□ 2.16
SCAMP3-202ENST00000355379 MYL6BP14649 208 aa28.52■■■□□ 2.16
SCAMP3-202ENST00000355379 ATP8B2P98198 1209 aa28.52■■■□□ 2.16
SCAMP3-202ENST00000355379 FNBP4Q8N3X1 1017 aaPredicted RBP28.52■■■□□ 2.16
SCAMP3-202ENST00000355379 BCL9LQ86UU0 1499 aa28.51■■■□□ 2.15
SCAMP3-202ENST00000355379 VPS72Q15906 364 aa28.51■■■□□ 2.15
SCAMP3-202ENST00000355379 LINS1Q8NG48 757 aa28.51■■■□□ 2.15
SCAMP3-202ENST00000355379 XAGE3Q8WTP9 111 aa28.51■■■□□ 2.15
SCAMP3-202ENST00000355379 ARFGEF2Q9Y6D5 1785 aa28.5■■■□□ 2.15
SCAMP3-202ENST00000355379 COPS6Q7L5N1 327 aa28.5■■■□□ 2.15
SCAMP3-202ENST00000355379 NGLY1Q96IV0 654 aa28.5■■■□□ 2.15
SCAMP3-202ENST00000355379 TEX13AQ9BXU3 409 aaPredicted RBP28.5■■■□□ 2.15
SCAMP3-202ENST00000355379 LNPKQ9C0E8 428 aa28.5■■■□□ 2.15
SCAMP3-202ENST00000355379 AIMP1Q12904 312 aaKnown RBP28.49■■■□□ 2.15
SCAMP3-202ENST00000355379 RIC3Q7Z5B4 369 aa28.49■■■□□ 2.15
SCAMP3-202ENST00000355379 ATG3Q9NT62 314 aa28.49■■■□□ 2.15
SCAMP3-202ENST00000355379 HDAC5Q9UQL6 1122 aa28.49■■■□□ 2.15
SCAMP3-202ENST00000355379 LRRFIP2Q9Y608 721 aaKnown RBP28.49■■■□□ 2.15
SCAMP3-202ENST00000355379 CCDC9Q9Y3X0 531 aaKnown RBP28.48■■■□□ 2.15
SCAMP3-202ENST00000355379 PTCD1O75127 700 aaKnown RBP28.48■■■□□ 2.15
SCAMP3-202ENST00000355379 C8orf37Q96NL8 207 aa28.48■■■□□ 2.15
SCAMP3-202ENST00000355379 ANKRD13DQ6ZTN6 518 aa28.46■■■□□ 2.15
SCAMP3-202ENST00000355379 METTL22Q9BUU2 404 aaPredicted RBP28.46■■■□□ 2.15
SCAMP3-202ENST00000355379 ASAP1Q9ULH1 1129 aa28.46■■■□□ 2.15
SCAMP3-202ENST00000355379 UTYO14607 1347 aa28.46■■■□□ 2.15
SCAMP3-202ENST00000355379 NUP188Q5SRE5 1749 aa28.44■■■□□ 2.14
SCAMP3-202ENST00000355379 NBPF26B4DH59 902 aa28.44■■■□□ 2.14
SCAMP3-202ENST00000355379 NEXNQ0ZGT2 675 aa28.44■■■□□ 2.14
SCAMP3-202ENST00000355379 NBPF14Q5TI25 921 aa28.44■■■□□ 2.14
SCAMP3-202ENST00000355379 NBPF10Q6P3W6 841 aaKnown RBP28.44■■■□□ 2.14
SCAMP3-202ENST00000355379 NBPF15Q8N660 670 aa28.44■■■□□ 2.14
SCAMP3-202ENST00000355379 NBPF7P0C2Y1 421 aaPredicted RBP28.43■■■□□ 2.14
SCAMP3-202ENST00000355379 AFDNP55196 1824 aaKnown RBP28.43■■■□□ 2.14
SCAMP3-202ENST00000355379 PLBD2Q8NHP8 589 aa28.43■■■□□ 2.14
SCAMP3-202ENST00000355379 ZBTB47Q9UFB7 747 aaPredicted RBP28.43■■■□□ 2.14
SCAMP3-202ENST00000355379 MARCH10Q8NA82 808 aaPredicted RBP28.42■■■□□ 2.14
SCAMP3-202ENST00000355379 SSH3Q8TE77 659 aa28.42■■■□□ 2.14
SCAMP3-202ENST00000355379 C9orf78Q9NZ63 289 aaPredicted RBP28.42■■■□□ 2.14
SCAMP3-202ENST00000355379 PNMA6EA0A0J9YXQ4 647 aa28.41■■■□□ 2.14
SCAMP3-202ENST00000355379 KAT6BQ8WYB5 2073 aa28.4■■■□□ 2.14
SCAMP3-202ENST00000355379 A1BGP04217 495 aa28.4■■■□□ 2.14
SCAMP3-202ENST00000355379 IGKV5-2P06315 115 aa28.4■■■□□ 2.14
SCAMP3-202ENST00000355379 PRIM1P49642 420 aaKnown RBP28.4■■■□□ 2.14
SCAMP3-202ENST00000355379 POLA2Q14181 598 aa28.4■■■□□ 2.14
SCAMP3-202ENST00000355379 CWF19L2Q2TBE0 894 aaKnown RBP28.4■■■□□ 2.14
SCAMP3-202ENST00000355379 NEURL1BA8MQ27 555 aa28.39■■■□□ 2.14
SCAMP3-202ENST00000355379 GRM8O00222 908 aa28.39■■■□□ 2.14
SCAMP3-202ENST00000355379 HSPA1LP34931 641 aa28.39■■■□□ 2.14
SCAMP3-202ENST00000355379 PIP4K2AP48426 406 aaPredicted RBP28.39■■■□□ 2.14
SCAMP3-202ENST00000355379 TJP1Q07157 1748 aa28.39■■■□□ 2.14
SCAMP3-202ENST00000355379 MTX1Q13505 466 aa28.38■■■□□ 2.13
SCAMP3-202ENST00000355379 MYD88Q99836 296 aa28.38■■■□□ 2.13
SCAMP3-202ENST00000355379 USP21Q9UK80 565 aa28.38■■■□□ 2.13
SCAMP3-202ENST00000355379 STARD3NLO95772 234 aa28.38■■■□□ 2.13
SCAMP3-202ENST00000355379 CICQ96RK0 1608 aaPredicted RBP28.37■■■□□ 2.13
SCAMP3-202ENST00000355379 DNAJC10Q8IXB1 793 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms