RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
SHTN1-202ENST00000355371 ERLIN2O94905 339 aa19.13■□□□□ 0.65
SHTN1-202ENST00000355371 RNF41Q9H4P4 317 aaPredicted RBP19.13■□□□□ 0.65
SHTN1-202ENST00000355371 PHAXQ9H814 394 aaKnown RBP19.13■□□□□ 0.65
SHTN1-202ENST00000355371 TBC1D9Q6ZT07 1266 aa19.12■□□□□ 0.65
SHTN1-202ENST00000355371 ANO10Q9NW15 660 aa19.12■□□□□ 0.65
SHTN1-202ENST00000355371 TCOF1Q13428 1488 aaKnown RBP19.12■□□□□ 0.65
SHTN1-202ENST00000355371 ZNF213O14771 459 aa19.12■□□□□ 0.65
SHTN1-202ENST00000355371 C8orf76Q96K31 380 aa19.12■□□□□ 0.65
SHTN1-202ENST00000355371 PATL2C9JE40 543 aaKnown RBP19.11■□□□□ 0.65
SHTN1-202ENST00000355371 A2MP01023 1474 aa19.11■□□□□ 0.65
SHTN1-202ENST00000355371 TTC22Q5TAA0 569 aa19.11■□□□□ 0.65
SHTN1-202ENST00000355371 CEBPAP49715 358 aaPredicted RBP19.11■□□□□ 0.65
SHTN1-202ENST00000355371 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
SHTN1-202ENST00000355371 ERLIN1O75477 346 aa19.11■□□□□ 0.65
SHTN1-202ENST00000355371 USP5P45974 858 aa19.11■□□□□ 0.65
SHTN1-202ENST00000355371 CCDC181Q5TID7 509 aa19.11■□□□□ 0.65
SHTN1-202ENST00000355371 CTAGE5O15320 804 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■■■■ 67.1
SHTN1-202ENST00000355371 PIP4K2BP78356 416 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 TMOD2Q9NZR1 351 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 TTF1Q15361 905 aaPredicted RBP19.1■□□□□ 0.65
SHTN1-202ENST00000355371 ZSCAN30Q86W11 494 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
SHTN1-202ENST00000355371 PARD3Q8TEW0 1356 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 IQCEQ6IPM2 695 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 FILIP1Q7Z7B0 1213 aa19.1■□□□□ 0.65
SHTN1-202ENST00000355371 SYCP2Q9BX26 1530 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 SSBP05455 408 aaKnown RBP eCLIP19.09■□□□□ 0.65
SHTN1-202ENST00000355371 PDCL3Q9H2J4 239 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 CWC25Q9NXE8 425 aaPredicted RBP19.09■□□□□ 0.65
SHTN1-202ENST00000355371 MINDY4BA8MYZ0 360 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 SKAP1Q86WV1 359 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 CTCFLQ8NI51 663 aaPredicted RBP19.09■□□□□ 0.65
SHTN1-202ENST00000355371 IGHDP01880 384 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 NUCB1Q02818 461 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
SHTN1-202ENST00000355371 ZNF518AQ6AHZ1 1483 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 FAM83GA6ND36 823 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 POLR3DP05423 398 aaPredicted RBP19.09■□□□□ 0.65
SHTN1-202ENST00000355371 ZNF76P36508 570 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 PPP1R42Q7Z4L9 355 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 IQCA1Q86XH1 822 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 SLC12A7Q9Y666 1083 aa19.09■□□□□ 0.65
SHTN1-202ENST00000355371 KIF2AO00139 706 aaPredicted RBP19.08■□□□□ 0.65
SHTN1-202ENST00000355371 TNPO1Q92973 898 aaKnown RBP19.08■□□□□ 0.65
SHTN1-202ENST00000355371 MKNK2Q9HBH9 465 aa19.08■□□□□ 0.65
SHTN1-202ENST00000355371 HMG20BQ9P0W2 317 aa19.08■□□□□ 0.65
SHTN1-202ENST00000355371 CCDC66A2RUB6 948 aa19.08■□□□□ 0.65
SHTN1-202ENST00000355371 CAMK4Q16566 473 aa19.08■□□□□ 0.65
SHTN1-202ENST00000355371 ANKRD24Q8TF21 1146 aa19.08■□□□□ 0.65
SHTN1-202ENST00000355371 SNRPA1P09661 255 aaKnown RBP19.08■□□□□ 0.64
SHTN1-202ENST00000355371 TBC1D32Q96NH3 1257 aa19.08■□□□□ 0.64
SHTN1-202ENST00000355371 CFAP100Q494V2 611 aa19.08■□□□□ 0.64
SHTN1-202ENST00000355371 PI4KAP2A4QPH2 592 aa19.07■□□□□ 0.64
SHTN1-202ENST00000355371 EXOC5O00471 708 aa19.07■□□□□ 0.64
SHTN1-202ENST00000355371 DZIP1Q86YF9 867 aaKnown RBP19.07■□□□□ 0.64
SHTN1-202ENST00000355371 PI4KAP1Q8N8J0 262 aa19.07■□□□□ 0.64
SHTN1-202ENST00000355371 SSFA2P28290 1259 aa19.07■□□□□ 0.64
SHTN1-202ENST00000355371 MPNDQ8N594 471 aa19.07■□□□□ 0.64
SHTN1-202ENST00000355371 UHRF1BP1LA0JNW5 1464 aa19.07■□□□□ 0.64
SHTN1-202ENST00000355371 EPB41L2O43491 1005 aaKnown RBP19.07■□□□□ 0.64
SHTN1-202ENST00000355371 ASXL2Q76L83 1435 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 EIF5P55010 431 aaKnown RBP19.06■□□□□ 0.64
SHTN1-202ENST00000355371 AXDND1Q5T1B0 1012 aaPredicted RBP19.06■□□□□ 0.64
SHTN1-202ENST00000355371 SLF2Q8IX21 1173 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 PPIP5K1Q6PFW1 1433 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 DDX19AQ9NUU7 478 aaKnown RBP19.06■□□□□ 0.64
SHTN1-202ENST00000355371 GOLGA6L10A6NI86 522 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
SHTN1-202ENST00000355371 EIF3JO75822 258 aaKnown RBP19.05■□□□□ 0.64
SHTN1-202ENST00000355371 SSRP1Q08945 709 aaKnown RBP19.05■□□□□ 0.64
SHTN1-202ENST00000355371 LEKR1Q6ZMV7 388 aa19.05■□□□□ 0.64
SHTN1-202ENST00000355371 PIBF1Q8WXW3 757 aa19.05■□□□□ 0.64
SHTN1-202ENST00000355371 ZBTB3Q9H5J0 574 aa19.05■□□□□ 0.64
SHTN1-202ENST00000355371 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
SHTN1-202ENST00000355371 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
SHTN1-202ENST00000355371 UQCRHLA0A096LP55 91 aa19.05■□□□□ 0.64
SHTN1-202ENST00000355371 UQCRHP07919 91 aa19.05■□□□□ 0.64
SHTN1-202ENST00000355371 PPP1R1BQ9UD71 204 aaPredicted RBP19.05■□□□□ 0.64
SHTN1-202ENST00000355371 GOLGA8BA8MQT2 603 aa19.04■□□□□ 0.64
SHTN1-202ENST00000355371 SFPQP23246 707 aaKnown RBP eCLIP19.04■□□□□ 0.64
SHTN1-202ENST00000355371 GOLGA8AA7E2F4 631 aa19.04■□□□□ 0.64
SHTN1-202ENST00000355371 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
SHTN1-202ENST00000355371 FAM177A1Q8N128 213 aaPredicted RBP19.04■□□□□ 0.64
SHTN1-202ENST00000355371 IFIT3O14879 490 aaKnown RBP19.03■□□□□ 0.64
SHTN1-202ENST00000355371 ZNF444Q8N0Y2 327 aaPredicted RBP19.03■□□□□ 0.64
SHTN1-202ENST00000355371 CDC5LQ99459 802 aaKnown RBP19.03■□□□□ 0.64
SHTN1-202ENST00000355371 ARHGAP29Q52LW3 1261 aa19.03■□□□□ 0.64
SHTN1-202ENST00000355371 RHPN1Q8TCX5 695 aa19.03■□□□□ 0.64
SHTN1-202ENST00000355371 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
SHTN1-202ENST00000355371 GOLIM4O00461 696 aa19.03■□□□□ 0.64
SHTN1-202ENST00000355371 MPHOSPH10O00566 681 aaKnown RBP19.03■□□□□ 0.64
SHTN1-202ENST00000355371 STX6O43752 255 aa19.03■□□□□ 0.64
SHTN1-202ENST00000355371 RANBP6O60518 1105 aaKnown RBP19.03■□□□□ 0.64
SHTN1-202ENST00000355371 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
SHTN1-202ENST00000355371 ZSCAN12O43309 604 aa19.02■□□□□ 0.64
SHTN1-202ENST00000355371 RAB34Q9BZG1 259 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms