RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 ALDH1L2Q3SY69 923 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 CDK5RAP3Q96JB5 506 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
GABPA-201ENST00000354828 CWC27Q6UX04 472 aaKnown RBP11.58□□□□□ -0.56
GABPA-201ENST00000354828 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 LDHCP07864 332 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
GABPA-201ENST00000354828 PREX2Q70Z35 1606 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 MTHFSDQ2M296 383 aaKnown RBP11.58□□□□□ -0.56
GABPA-201ENST00000354828 ANKRD20A12PQ8NF67 263 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 CCDC8Q9H0W5 538 aaPredicted RBP11.58□□□□□ -0.56
GABPA-201ENST00000354828 CHPF2Q9P2E5 772 aa11.58□□□□□ -0.56
GABPA-201ENST00000354828 TPM3P06753 285 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 NEK4P51957 841 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 HDAC9Q9UKV0 1011 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
GABPA-201ENST00000354828 ARHGEF12Q9NZN5 1544 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 PIBF1Q8WXW3 757 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 FEZ1Q99689 392 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
GABPA-201ENST00000354828 RXRBP28702 533 aa11.57□□□□□ -0.56
GABPA-201ENST00000354828 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
GABPA-201ENST00000354828 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
GABPA-201ENST00000354828 IPO9Q96P70 1041 aaKnown RBP11.57□□□□□ -0.56
GABPA-201ENST00000354828 TRPC5Q9UL62 973 aaPredicted RBP11.57□□□□□ -0.56
GABPA-201ENST00000354828 HECW2Q9P2P5 1572 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 NPHP4O75161 1426 aaPredicted RBP11.56□□□□□ -0.56
GABPA-201ENST00000354828 RAB11FIP3O75154 756 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 TPM1P09493 284 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 TESK2Q96S53 571 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.56□□□□□ -0.56
GABPA-201ENST00000354828 PIK3R4Q99570 1358 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 ZNF335Q9H4Z2 1342 aaPredicted RBP11.56□□□□□ -0.56
GABPA-201ENST00000354828 KRT18P05783 430 aaKnown RBP11.56□□□□□ -0.56
GABPA-201ENST00000354828 CCDC73Q6ZRK6 1079 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 NAPBQ9H115 298 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 CYP46A1Q9Y6A2 500 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 ZNF76P36508 570 aa11.56□□□□□ -0.56
GABPA-201ENST00000354828 F8W031 263 aaPredicted RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 IMMTQ16891 758 aaKnown RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 RBM26Q5T8P6 1007 aaKnown RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 STK3Q13188 491 aa11.55□□□□□ -0.56
GABPA-201ENST00000354828 CHD1LQ86WJ1 897 aa11.55□□□□□ -0.56
GABPA-201ENST00000354828 NSFL1CQ9UNZ2 370 aaKnown RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 IBSPP21815 317 aaPredicted RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 KDM6BO15054 1643 aa11.55□□□□□ -0.56
GABPA-201ENST00000354828 PTPRCP08575 1304 aa11.55□□□□□ -0.56
GABPA-201ENST00000354828 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
GABPA-201ENST00000354828 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
GABPA-201ENST00000354828 GLRX3O76003 335 aaKnown RBP11.54□□□□□ -0.56
GABPA-201ENST00000354828 BAG3O95817 575 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
GABPA-201ENST00000354828 ADCY10Q96PN6 1610 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 RIMBP3CA6NJZ7 1639 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 RIMBP3BA6NNM3 1639 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 RIMBP3Q9UFD9 1639 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
GABPA-201ENST00000354828 SNRKQ9NRH2 765 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 LMOD1P29536 600 aaPredicted RBP11.54□□□□□ -0.56
GABPA-201ENST00000354828 KDM5DQ9BY66 1539 aa11.54□□□□□ -0.56
GABPA-201ENST00000354828 DDX11L8A8MPP1 907 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 TXLNAP40222 546 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 CNBD1Q8NA66 436 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 CABP5Q9NP86 173 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
GABPA-201ENST00000354828 SMARCA5O60264 1052 aaPredicted RBP11.53□□□□□ -0.56
GABPA-201ENST00000354828 NF2P35240 595 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
GABPA-201ENST00000354828 HLA-DOAP06340 250 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
GABPA-201ENST00000354828 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
GABPA-201ENST00000354828 MX1P20591 662 aa11.52□□□□□ -0.57
GABPA-201ENST00000354828 RIMBP2O15034 1052 aa11.52□□□□□ -0.57
GABPA-201ENST00000354828 GPR162Q16538 588 aa11.52□□□□□ -0.57
GABPA-201ENST00000354828 ANKRD1Q15327 319 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 GJA3Q9Y6H8 435 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 ADGBQ8N7X0 1667 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 MAP3K5Q99683 1374 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 EYA3Q99504 573 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 ZHX3Q9H4I2 956 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 VEZTQ9HBM0 779 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 PDCP20941 246 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 EPS15P42566 896 aa11.51□□□□□ -0.57
GABPA-201ENST00000354828 SEC63Q9UGP8 760 aaKnown RBP11.51□□□□□ -0.57
GABPA-201ENST00000354828 NUCB2P80303 420 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 EFCAB6Q5THR3 1501 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 IRS4O14654 1257 aaPredicted RBP11.5□□□□□ -0.57
GABPA-201ENST00000354828 TTF1Q15361 905 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms