RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 KLHDC4Q8TBB5 520 aa14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 IQSEC3Q9UPP2 1182 aaPredicted RBP14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 KDM5AP29375 1690 aaKnown RBP14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 GRM8O00222 908 aa14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 TBC1D9Q6ZT07 1266 aa14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 JAKMIP1Q96N16 626 aaKnown RBP14.83□□□□□ -0.04
PCDHB11-201ENST00000354757 IGHMBP2P38935 993 aaKnown RBP14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 FAM98CQ17RN3 349 aaKnown RBP14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 RHPN1Q8TCX5 695 aa14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 ANKRD44Q8N8A2 993 aa14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 RABEP1Q15276 862 aa14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 LRP2BPQ9P2M1 347 aa14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 SETD1BQ9UPS6 1966 aaKnown RBP14.82□□□□□ -0.04
PCDHB11-201ENST00000354757 DDX11L8A8MPP1 907 aa14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 IFIT1P09914 478 aaKnown RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 PPFIA3O75145 1194 aa14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 PRIM1P49642 420 aaKnown RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 OTUD7AQ8TE49 926 aaPredicted RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 SYAP1Q96A49 352 aaPredicted RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 RAI14Q9P0K7 980 aa14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 MSNP26038 577 aaKnown RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 PRPF40BQ6NWY9 871 aaKnown RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 CEBPZQ03701 1054 aaKnown RBP14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 AMOTL1Q8IY63 956 aa14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 CEP152O94986 1710 aa14.81□□□□□ -0.04
PCDHB11-201ENST00000354757 ERICH2A1L162 156 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 ZBTB7BO15156 539 aaPredicted RBP14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 USP19O94966 1318 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 UNC13BO14795 1591 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 E9PCH4 1651 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 DDX46Q7L014 1031 aaKnown RBP14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 HELBQ8NG08 1087 aaPredicted RBP14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 ZNF652Q9Y2D9 606 aa14.8□□□□□ -0.04
PCDHB11-201ENST00000354757 USP6P35125 1406 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 GOLIM4O00461 696 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 HDAC1Q13547 482 aaPredicted RBP14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 BICD2Q8TD16 824 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 TRIM34Q9BYJ4 488 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 CROCC2H7BZ55 1655 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 NBPF7P0C2Y1 421 aaPredicted RBP14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 NUCB1Q02818 461 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 LINS1Q8NG48 757 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 SDSP20132 328 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 ECHDC1Q9NTX5 307 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
PCDHB11-201ENST00000354757 MARCH6O60337 910 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 SEC24BO95487 1268 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 FAM89AQ96GI7 184 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 FIBPO43427 364 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 PSMA5P28066 241 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 DNAJC10Q8IXB1 793 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 MAP3K4Q9Y6R4 1608 aa14.78□□□□□ -0.04
PCDHB11-201ENST00000354757 HIP1O00291 1037 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 CLSTN1O94985 981 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 CASTP20810 708 aaKnown RBP14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 CDK11BP21127 795 aaKnown RBP14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 TRIM29Q14134 588 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 BLOC1S2Q6QNY1 142 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 DDX21Q9NR30 783 aaKnown RBP eCLIP14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 PRAMEF22A3QJZ6 481 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 NUCB2P80303 420 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 AK7Q96M32 723 aa14.77□□□□□ -0.04
PCDHB11-201ENST00000354757 ANKRD18BA2A2Z9 1011 aa14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 GNL3LQ9NVN8 582 aaKnown RBP14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 PDE1AP54750 535 aa14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 NIP7Q9Y221 180 aaKnown RBP eCLIP14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 ZMYM4Q5VZL5 1548 aa14.77□□□□□ -0.05
PCDHB11-201ENST00000354757 DZIP3Q86Y13 1208 aaKnown RBP14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 TEX13AQ9BXU3 409 aaPredicted RBP14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 BCL11BQ9C0K0 894 aaPredicted RBP14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 ANKIB1Q9P2G1 1089 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 PCDH11XQ9BZA7 1347 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 PCDH11YQ9BZA8 1340 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 ATP8B2P98198 1209 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 ATP2B2Q01814 1243 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 SLC4A8Q2Y0W8 1093 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 SLC52A2Q9HAB3 445 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 SPHKAPQ2M3C7 1700 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 DDX11Q96FC9 970 aa14.76□□□□□ -0.05
PCDHB11-201ENST00000354757 PRPF40AO75400 957 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms