RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 CHD4Q14839 1912 aa15.27■□□□□ 0.03
CDRT1-202ENST00000354433 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
CDRT1-202ENST00000354433 BTBD11A6QL63 1104 aa15.26■□□□□ 0.03
CDRT1-202ENST00000354433 STARD3NLO95772 234 aa15.26■□□□□ 0.03
CDRT1-202ENST00000354433 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
CDRT1-202ENST00000354433 FKBP8Q14318 412 aa15.26■□□□□ 0.03
CDRT1-202ENST00000354433 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
CDRT1-202ENST00000354433 RALBP1Q15311 655 aa15.25■□□□□ 0.03
CDRT1-202ENST00000354433 USPL1Q5W0Q7 1092 aa15.25■□□□□ 0.03
CDRT1-202ENST00000354433 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
CDRT1-202ENST00000354433 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
CDRT1-202ENST00000354433 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
CDRT1-202ENST00000354433 HEG1Q9ULI3 1381 aa15.25■□□□□ 0.03
CDRT1-202ENST00000354433 MCM10Q7L590 875 aa15.24■□□□□ 0.03
CDRT1-202ENST00000354433 UBR2Q8IWV8 1755 aa15.24■□□□□ 0.03
CDRT1-202ENST00000354433 TGFB2P61812 414 aa15.24■□□□□ 0.03
CDRT1-202ENST00000354433 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
CDRT1-202ENST00000354433 BCS1LQ9Y276 419 aa15.23■□□□□ 0.03
CDRT1-202ENST00000354433 A0A0G2JLW4 131 aa15.22■□□□□ 0.03
CDRT1-202ENST00000354433 DDR1Q08345 913 aa15.22■□□□□ 0.03
CDRT1-202ENST00000354433 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
CDRT1-202ENST00000354433 TEX13AQ9BXU3 409 aaPredicted RBP15.22■□□□□ 0.03
CDRT1-202ENST00000354433 NARFQ9UHQ1 456 aa15.22■□□□□ 0.03
CDRT1-202ENST00000354433 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.03
CDRT1-202ENST00000354433 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.02
CDRT1-202ENST00000354433 KCNQ3O43525 872 aa15.2■□□□□ 0.02
CDRT1-202ENST00000354433 DPEP1P16444 411 aa15.2■□□□□ 0.02
CDRT1-202ENST00000354433 A0A087WZG4 1122 aa15.19■□□□□ 0.02
CDRT1-202ENST00000354433 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
CDRT1-202ENST00000354433 MYBBP1AQ9BQG0 1328 aaKnown RBP15.19■□□□□ 0.02
CDRT1-202ENST00000354433 HTATSF1O43719 755 aaKnown RBP15.19■□□□□ 0.02
CDRT1-202ENST00000354433 BICDL1Q6ZP65 573 aa15.19■□□□□ 0.02
CDRT1-202ENST00000354433 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
CDRT1-202ENST00000354433 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
CDRT1-202ENST00000354433 N4BP2Q86UW6 1770 aaPredicted RBP15.18■□□□□ 0.02
CDRT1-202ENST00000354433 ATP10DQ9P241 1426 aa15.18■□□□□ 0.02
CDRT1-202ENST00000354433 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
CDRT1-202ENST00000354433 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
CDRT1-202ENST00000354433 EIF5P55010 431 aaKnown RBP15.18■□□□□ 0.02
CDRT1-202ENST00000354433 NFIXQ14938 502 aa15.18■□□□□ 0.02
CDRT1-202ENST00000354433 A1BGP04217 495 aa15.17■□□□□ 0.02
CDRT1-202ENST00000354433 TM4SF1P30408 202 aa15.17■□□□□ 0.02
CDRT1-202ENST00000354433 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
CDRT1-202ENST00000354433 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
CDRT1-202ENST00000354433 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
CDRT1-202ENST00000354433 BCL2L12Q9HB09 334 aa15.16■□□□□ 0.02
CDRT1-202ENST00000354433 PIM2Q9P1W9 311 aa15.16■□□□□ 0.02
CDRT1-202ENST00000354433 TBC1D2BQ9UPU7 963 aa15.16■□□□□ 0.02
CDRT1-202ENST00000354433 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
CDRT1-202ENST00000354433 PRAMEF22A3QJZ6 481 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 NPHP1O15259 732 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 SERPINB2P05120 415 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 SNRPA1P09661 255 aaKnown RBP15.15■□□□□ 0.02
CDRT1-202ENST00000354433 CHRNA5P30532 468 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 NFE2L2Q16236 605 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 TAF7Q15545 349 aaPredicted RBP15.15■□□□□ 0.02
CDRT1-202ENST00000354433 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
CDRT1-202ENST00000354433 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 GPBP1L1Q9HC44 474 aaPredicted RBP15.15■□□□□ 0.02
CDRT1-202ENST00000354433 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
CDRT1-202ENST00000354433 DZIP3Q86Y13 1208 aaKnown RBP15.14■□□□□ 0.01
CDRT1-202ENST00000354433 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
CDRT1-202ENST00000354433 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
CDRT1-202ENST00000354433 PNISRQ8TF01 805 aaKnown RBP15.13■□□□□ 0.01
CDRT1-202ENST00000354433 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
CDRT1-202ENST00000354433 ADCY9O60503 1353 aa15.13■□□□□ 0.01
CDRT1-202ENST00000354433 KCNA3P22001 575 aa15.12■□□□□ 0.01
CDRT1-202ENST00000354433 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
CDRT1-202ENST00000354433 C1QTNF8P60827 252 aa15.11■□□□□ 0.01
CDRT1-202ENST00000354433 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDRT1-202ENST00000354433 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
CDRT1-202ENST00000354433 CAMTA2O94983 1202 aa15.1■□□□□ 0.01
CDRT1-202ENST00000354433 RIPK4P57078 832 aa15.1■□□□□ 0.01
CDRT1-202ENST00000354433 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
CDRT1-202ENST00000354433 SENP3-EIF4A1A0A087X0R7 540 aa15.09■□□□□ 0.01
CDRT1-202ENST00000354433 H0YIN7 160 aa15.09■□□□□ 0.01
CDRT1-202ENST00000354433 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
CDRT1-202ENST00000354433 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
CDRT1-202ENST00000354433 CCDC24Q8N4L8 307 aa15.09■□□□□ 0.01
CDRT1-202ENST00000354433 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
CDRT1-202ENST00000354433 BRCA1P38398 1863 aaKnown RBP15.09■□□□□ 0.01
CDRT1-202ENST00000354433 NRXN2Q9P2S2 1712 aa15.08■□□□□ 0.01
CDRT1-202ENST00000354433 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0.01
CDRT1-202ENST00000354433 DLG5Q8TDM6 1919 aa15.08■□□□□ 0.01
CDRT1-202ENST00000354433 ST5P78524 1137 aa15.08■□□□□ 0
CDRT1-202ENST00000354433 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
CDRT1-202ENST00000354433 NEUROD2Q15784 382 aa15.08■□□□□ 0
CDRT1-202ENST00000354433 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
CDRT1-202ENST00000354433 PRR5LQ6MZQ0 368 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 NGEFQ8N5V2 710 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 RRP7AQ9Y3A4 280 aaKnown RBP15.07■□□□□ 0
CDRT1-202ENST00000354433 BCORQ6W2J9 1755 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 KDM3BQ7LBC6 1761 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 NBPF26B4DH59 902 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 PDE6BP35913 854 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
CDRT1-202ENST00000354433 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms