RNA–Protein interactions for RNA: ENST00000354371.6

COPS8-201, Transcript of COP9 signalosome subunit 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS8, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-201ENST00000354371 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
COPS8-201ENST00000354371 C16orf45Q96MC5 204 aaPredicted RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 H2AFXP16104 143 aaPredicted RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
COPS8-201ENST00000354371 PROSER2Q86WR7 435 aaPredicted RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
COPS8-201ENST00000354371 PLCH2O75038 1416 aa13.48□□□□□ -0.25
COPS8-201ENST00000354371 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
COPS8-201ENST00000354371 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
COPS8-201ENST00000354371 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
COPS8-201ENST00000354371 GNAI1P63096 354 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
COPS8-201ENST00000354371 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 MAP4K4O95819 1239 aaPredicted RBP13.47□□□□□ -0.25
COPS8-201ENST00000354371 SYT10Q6XYQ8 523 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
COPS8-201ENST00000354371 FOXO3O43524 673 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
COPS8-201ENST00000354371 MYOM2P54296 1465 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 USP27XA6NNY8 438 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.25
COPS8-201ENST00000354371 MCM10Q7L590 875 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 LRRN4CLQ8ND94 238 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 MX1P20591 662 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 NYAP1Q6ZVC0 841 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
COPS8-201ENST00000354371 GCC1Q96CN9 775 aa13.46□□□□□ -0.26
COPS8-201ENST00000354371 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
COPS8-201ENST00000354371 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
COPS8-201ENST00000354371 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 FAM83GA6ND36 823 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 TRIM5Q9C035 493 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 CDC42BPBQ9Y5S2 1711 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
COPS8-201ENST00000354371 TPM4P67936 248 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 ST5P78524 1137 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
COPS8-201ENST00000354371 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
COPS8-201ENST00000354371 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
COPS8-201ENST00000354371 ZRANB2O95218 330 aaKnown RBP eCLIP13.44□□□□□ -0.26
COPS8-201ENST00000354371 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
COPS8-201ENST00000354371 TNNT1P13805 278 aa13.44□□□□□ -0.26
COPS8-201ENST00000354371 ELF2Q15723 593 aa13.44□□□□□ -0.26
COPS8-201ENST00000354371 OTUD7AQ8TE49 926 aaPredicted RBP13.44□□□□□ -0.26
COPS8-201ENST00000354371 PAXBP1Q9Y5B6 917 aa13.44□□□□□ -0.26
COPS8-201ENST00000354371 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
COPS8-201ENST00000354371 MYO1CO00159 1063 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
COPS8-201ENST00000354371 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 UPF3BQ9BZI7 483 aaKnown RBP13.43□□□□□ -0.26
COPS8-201ENST00000354371 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 NOL10Q9BSC4 688 aaKnown RBP13.43□□□□□ -0.26
COPS8-201ENST00000354371 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
COPS8-201ENST00000354371 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 EVA1CP58658 441 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
COPS8-201ENST00000354371 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
COPS8-201ENST00000354371 ICE2Q659A1 982 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
COPS8-201ENST00000354371 DDX54Q8TDD1 881 aaKnown RBP13.42□□□□□ -0.26
COPS8-201ENST00000354371 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
COPS8-201ENST00000354371 REXO1L1PQ8IX06 675 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 IL17RAQ96F46 866 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
COPS8-201ENST00000354371 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 PLA2G4DQ86XP0 818 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 RASSF4Q9H2L5 321 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 PES1O00541 588 aaKnown RBP13.42□□□□□ -0.26
COPS8-201ENST00000354371 ATF3P18847 181 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 GUCY2CP25092 1073 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 IL1RAPL2Q9NP60 686 aa13.42□□□□□ -0.26
COPS8-201ENST00000354371 CACTINQ8WUQ7 758 aaKnown RBP13.41□□□□□ -0.26
COPS8-201ENST00000354371 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
COPS8-201ENST00000354371 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
COPS8-201ENST00000354371 SMARCE1Q969G3 411 aa13.41□□□□□ -0.26
COPS8-201ENST00000354371 NCAPGQ9BPX3 1015 aa13.41□□□□□ -0.26
COPS8-201ENST00000354371 IFIT2P09913 472 aaKnown RBP13.41□□□□□ -0.26
COPS8-201ENST00000354371 SDSP20132 328 aa13.41□□□□□ -0.26
COPS8-201ENST00000354371 CNPY2Q9Y2B0 182 aa13.41□□□□□ -0.26
COPS8-201ENST00000354371 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.26
COPS8-201ENST00000354371 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
COPS8-201ENST00000354371 MAST1Q9Y2H9 1570 aa13.4□□□□□ -0.26
COPS8-201ENST00000354371 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
COPS8-201ENST00000354371 PNMA6AP0CW24 399 aaPredicted RBP13.4□□□□□ -0.26
COPS8-201ENST00000354371 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms