RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 PRC1O43663 620 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 PPP1R12BO60237 982 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 CDKL5O76039 1030 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 APBB1IPQ7Z5R6 666 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 CCP110O43303 1012 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 GPATCH11Q8N954 259 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 BIN1O00499 593 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 RFC4P35249 363 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 GJC1P36383 396 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 TSG101Q99816 390 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
COL11A1-201ENST00000353414 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL11A1-201ENST00000353414 SP4Q02446 784 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
COL11A1-201ENST00000353414 FOXO3O43524 673 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 IFFO1Q0D2I5 559 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 ZBTB21Q9ULJ3 1066 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 HSP90AA4PQ58FG1 418 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 TSHZ3Q63HK5 1081 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 CHD1LQ86WJ1 897 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 SPA17Q15506 151 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
COL11A1-201ENST00000353414 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 UQCRHP07919 91 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 CASQ1P31415 396 aa11.61□□□□□ -0.55
COL11A1-201ENST00000353414 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 C8orf37Q96NL8 207 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 GOLGA6L7A0A1B0GV03 622 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 SYCE3A1L190 88 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 CHRNA2Q15822 529 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 TSPOAP1O95153 1857 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
COL11A1-201ENST00000353414 SLC12A7Q9Y666 1083 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 AKNAQ7Z591 1439 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 MRE11P49959 708 aa11.6□□□□□ -0.55
COL11A1-201ENST00000353414 K7ELQ4 463 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-201ENST00000353414 IFIT3O14879 490 aaKnown RBP11.59□□□□□ -0.55
COL11A1-201ENST00000353414 PABPN1LA6NDY0 278 aaKnown RBP11.59□□□□□ -0.55
COL11A1-201ENST00000353414 NOP2P46087 812 aaKnown RBP11.59□□□□□ -0.55
COL11A1-201ENST00000353414 CCDC148Q8NFR7 591 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 PAIP2Q9BPZ3 127 aaKnown RBP11.59□□□□□ -0.55
COL11A1-201ENST00000353414 FAM170AA1A519 330 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
COL11A1-201ENST00000353414 SYNCQ9H7C4 482 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 HSPA2P54652 639 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 SLC5A1P13866 664 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 HOOK3Q86VS8 718 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 CTNNA3Q9UI47 895 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
COL11A1-201ENST00000353414 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.55
COL11A1-201ENST00000353414 LUZP1Q86V48 1076 aa11.58□□□□□ -0.55
COL11A1-201ENST00000353414 DNAI2Q9GZS0 605 aa11.58□□□□□ -0.55
COL11A1-201ENST00000353414 CEP131Q9UPN4 1083 aa11.58□□□□□ -0.55
COL11A1-201ENST00000353414 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.56
COL11A1-201ENST00000353414 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
COL11A1-201ENST00000353414 ZNF213O14771 459 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 CBX1P83916 185 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 RNF187Q5TA31 235 aaPredicted RBP11.58□□□□□ -0.56
COL11A1-201ENST00000353414 EP400NLQ6ZTU2 488 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 POLR3GO15318 223 aaPredicted RBP11.58□□□□□ -0.56
COL11A1-201ENST00000353414 IDEP14735 1019 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 FKBP15Q5T1M5 1219 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 GCC1Q96CN9 775 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
COL11A1-201ENST00000353414 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 MYO1BO43795 1136 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 STAMBPO95630 424 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 CETN2P41208 172 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 TMEM57Q8N5G2 664 aa11.58□□□□□ -0.56
COL11A1-201ENST00000353414 TOM1O60784 492 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 ATP2C2O75185 946 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 CSPG5O95196 566 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-201ENST00000353414 MBD3O95983 291 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 TAF7Q15545 349 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-201ENST00000353414 ZNF287Q9HBT7 754 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 GOLIM4O00461 696 aa11.57□□□□□ -0.56
COL11A1-201ENST00000353414 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
COL11A1-201ENST00000353414 TSPY2A6NKD2 308 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 GOLGA8BA8MQT2 603 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 TMCO3Q6UWJ1 677 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 SSX2IPQ9Y2D8 614 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL11A1-201ENST00000353414 WASF1Q92558 559 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 GDPD2Q9HCC8 539 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 MTIF2P46199 727 aaKnown RBP11.56□□□□□ -0.56
COL11A1-201ENST00000353414 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
COL11A1-201ENST00000353414 GOLGA8AA7E2F4 631 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 MAP3K12Q12852 859 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms