RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 BRPF1P55201 1214 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-201ENST00000352993 CCDC83Q8IWF9 413 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 FAM200AQ8TCP9 573 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 TNMDQ9H2S6 317 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 TRPM2O94759 1503 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 ZNF397Q8NF99 534 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-201ENST00000352993 ST7Q9NRC1 585 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 CLIP2Q9UDT6 1046 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 PTPN14Q15678 1187 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 DDX54Q8TDD1 881 aaKnown RBP9.08□□□□□ -0.96
BRCA1-201ENST00000352993 C14orf93Q9H972 538 aaKnown RBP9.08□□□□□ -0.96
BRCA1-201ENST00000352993 ZNF215Q9UL58 517 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-201ENST00000352993 PPP6R1Q9UPN7 881 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 F6X3S4 739 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 CPA1P15085 419 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 ELF2Q15723 593 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 ANO6Q4KMQ2 910 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 SBNO2Q9Y2G9 1366 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 PTCH1Q13635 1447 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 GOLGA6L19H0YKK7 550 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 CHMLP26374 656 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 ANAPC15P60006 121 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 TYRO3Q06418 890 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 GGT6Q6P531 493 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 FILIP1Q7Z7B0 1213 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 GTF3C6Q969F1 213 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 NOL10Q9BSC4 688 aaKnown RBP9.08□□□□□ -0.96
BRCA1-201ENST00000352993 MORC2Q9Y6X9 1032 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-201ENST00000352993 A0A1W2PP64 1363 aa9.08□□□□□ -0.96
BRCA1-201ENST00000352993 SLIT1O75093 1534 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 ZSCAN25Q6NSZ9 544 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 LRRCC1Q9C099 1032 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 IL1RAPL2Q9NP60 686 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 PIK3C2BO00750 1634 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 GJB2P29033 226 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 KMT5BQ4FZB7 885 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 MSH6P52701 1360 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 POLR3GO15318 223 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-201ENST00000352993 AK2P54819 239 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 FAM173BQ6P4H8 233 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 BICD2Q8TD16 824 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 FBXW7Q969H0 707 aa9.07□□□□□ -0.96
BRCA1-201ENST00000352993 ADGRB2O60241 1585 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 HTATSF1O43719 755 aaKnown RBP9.06□□□□□ -0.96
BRCA1-201ENST00000352993 GORABQ5T7V8 394 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 TFIP11Q9UBB9 837 aaKnown RBP9.06□□□□□ -0.96
BRCA1-201ENST00000352993 LIMCH1Q9UPQ0 1083 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 CBX8Q9HC52 389 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 PIK3R4Q99570 1358 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 CASTP20810 708 aaKnown RBP9.06□□□□□ -0.96
BRCA1-201ENST00000352993 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-201ENST00000352993 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 CACTINQ8WUQ7 758 aaKnown RBP9.06□□□□□ -0.96
BRCA1-201ENST00000352993 DACT1Q9NYF0 836 aa9.06□□□□□ -0.96
BRCA1-201ENST00000352993 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 ZNF165P49910 485 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 HAP1P54257 671 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-201ENST00000352993 KRT85P78386 507 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 SYCP1Q15431 976 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 FBXO38Q6PIJ6 1188 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 TMEM87AQ8NBN3 555 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 DNAJC25Q9H1X3 360 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 RGS12O14924 1447 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 BECN2A8MW95 431 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 LIG1P18858 919 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 ZNF75DP51815 510 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 UNC5CLQ8IV45 518 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 SYTL4Q96C24 671 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-201ENST00000352993 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
BRCA1-201ENST00000352993 LARP1BQ659C4 914 aaKnown RBP9.04□□□□□ -0.96
BRCA1-201ENST00000352993 NECAB1Q8N987 351 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 ZFP91Q96JP5 570 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-201ENST00000352993 FUCA2Q9BTY2 467 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 MRVI1Q9Y6F6 885 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 CFAP65Q6ZU64 1925 aaKnown RBP9.04□□□□□ -0.96
BRCA1-201ENST00000352993 GNAI2P04899 355 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 SKILP12757 684 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 CWC27Q6UX04 472 aaKnown RBP9.04□□□□□ -0.96
BRCA1-201ENST00000352993 ZBTB9Q96C00 473 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 SPG7Q9UQ90 795 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 RPAP1Q9BWH6 1393 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-201ENST00000352993 ABCC3O15438 1527 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 HNRNPH2P55795 449 aaKnown RBP9.04□□□□□ -0.96
BRCA1-201ENST00000352993 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 TEX35Q5T0J7 233 aa9.04□□□□□ -0.96
BRCA1-201ENST00000352993 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
BRCA1-201ENST00000352993 BMS1Q14692 1282 aaKnown RBP9.03□□□□□ -0.96
BRCA1-201ENST00000352993 MCM10Q7L590 875 aa9.03□□□□□ -0.96
BRCA1-201ENST00000352993 POLKQ9UBT6 870 aa9.03□□□□□ -0.96
BRCA1-201ENST00000352993 SLU7O95391 586 aaKnown RBP9.03□□□□□ -0.96
BRCA1-201ENST00000352993 SPATA32Q96LK8 384 aa9.03□□□□□ -0.96
BRCA1-201ENST00000352993 JAKMIP1Q96N16 626 aaKnown RBP9.03□□□□□ -0.96
BRCA1-201ENST00000352993 RUFY3Q7L099 469 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms