RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 IL1RAPL2Q9NP60 686 aa29.76■■■□□ 2.35
CPNE1-202ENST00000352393 HDGFL1Q5TGJ6 251 aa29.75■■■□□ 2.35
CPNE1-202ENST00000352393 NOL8Q76FK4 1167 aaKnown RBP29.75■■■□□ 2.35
CPNE1-202ENST00000352393 UPF3BQ9BZI7 483 aaKnown RBP29.75■■■□□ 2.35
CPNE1-202ENST00000352393 LTN1O94822 1766 aa29.75■■■□□ 2.35
CPNE1-202ENST00000352393 RRP9O43818 475 aaKnown RBP29.75■■■□□ 2.35
CPNE1-202ENST00000352393 PI4K2BQ8TCG2 481 aa29.74■■■□□ 2.35
CPNE1-202ENST00000352393 CEMIPQ8WUJ3 1361 aa29.73■■■□□ 2.35
CPNE1-202ENST00000352393 PHAXQ9H814 394 aaKnown RBP29.73■■■□□ 2.35
CPNE1-202ENST00000352393 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.73■■■□□ 2.35
CPNE1-202ENST00000352393 PLEKHG5O94827 1062 aa29.72■■■□□ 2.35
CPNE1-202ENST00000352393 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.72■■■□□ 2.35
CPNE1-202ENST00000352393 KIAA1211Q6ZU35 1233 aa29.72■■■□□ 2.35
CPNE1-202ENST00000352393 PPP1R42Q7Z4L9 355 aa29.72■■■□□ 2.35
CPNE1-202ENST00000352393 NUTM1Q86Y26 1132 aa29.72■■■□□ 2.35
CPNE1-202ENST00000352393 RAD50Q92878 1312 aa29.72■■■□□ 2.35
CPNE1-202ENST00000352393 ZNF500O60304 480 aaPredicted RBP29.71■■■□□ 2.35
CPNE1-202ENST00000352393 RHPN1Q8TCX5 695 aa29.71■■■□□ 2.35
CPNE1-202ENST00000352393 SURF6O75683 361 aaKnown RBP29.69■■■□□ 2.34
CPNE1-202ENST00000352393 CEBPAP49715 358 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-202ENST00000352393 SGSM2O43147 1006 aa29.69■■■□□ 2.34
CPNE1-202ENST00000352393 HSP90AA2PQ14568 343 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-202ENST00000352393 NUTM2GQ5VZR2 741 aa29.69■■■□□ 2.34
CPNE1-202ENST00000352393 WDR33Q9C0J8 1336 aaKnown RBP29.69■■■□□ 2.34
CPNE1-202ENST00000352393 RPAP1Q9BWH6 1393 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-202ENST00000352393 SYAP1Q96A49 352 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-202ENST00000352393 KIF1BPQ96EK5 621 aa29.67■■■□□ 2.34
CPNE1-202ENST00000352393 LTV1Q96GA3 475 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-202ENST00000352393 TCHHQ07283 1943 aa29.67■■■□□ 2.34
CPNE1-202ENST00000352393 ZKSCAN5Q9Y2L8 839 aa29.66■■■□□ 2.34
CPNE1-202ENST00000352393 LMO7Q8WWI1 1683 aa29.66■■■□□ 2.34
CPNE1-202ENST00000352393 TERF1P54274 439 aa29.66■■■□□ 2.34
CPNE1-202ENST00000352393 HOXB7P09629 217 aa29.65■■■□□ 2.34
CPNE1-202ENST00000352393 TTC14Q96N46 770 aa29.65■■■□□ 2.34
CPNE1-202ENST00000352393 LSG1Q9H089 658 aaKnown RBP29.65■■■□□ 2.34
CPNE1-202ENST00000352393 TSPY26PQ9H489 355 aa29.65■■■□□ 2.34
CPNE1-202ENST00000352393 USP42Q9H9J4 1324 aaKnown RBP29.65■■■□□ 2.34
CPNE1-202ENST00000352393 SRGAP3O43295 1099 aa29.65■■■□□ 2.34
CPNE1-202ENST00000352393 MAP4K4O95819 1239 aaPredicted RBP29.65■■■□□ 2.34
CPNE1-202ENST00000352393 USHBP1Q8N6Y0 703 aa29.65■■■□□ 2.34
CPNE1-202ENST00000352393 SNX14Q9Y5W7 946 aa29.65■■■□□ 2.34
CPNE1-202ENST00000352393 MCM5P33992 734 aa29.64■■■□□ 2.34
CPNE1-202ENST00000352393 TMEM87AQ8NBN3 555 aa29.64■■■□□ 2.34
CPNE1-202ENST00000352393 EIF4A1P60842 406 aaKnown RBP29.63■■■□□ 2.33
CPNE1-202ENST00000352393 BEND3Q5T5X7 828 aa29.63■■■□□ 2.33
CPNE1-202ENST00000352393 ABTB2Q8N961 1025 aa29.63■■■□□ 2.33
CPNE1-202ENST00000352393 NFAT5O94916 1531 aa29.63■■■□□ 2.33
CPNE1-202ENST00000352393 NBPF7P0C2Y1 421 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-202ENST00000352393 CNTROBQ8N137 903 aa29.63■■■□□ 2.33
CPNE1-202ENST00000352393 CCDC39Q9UFE4 941 aa29.63■■■□□ 2.33
CPNE1-202ENST00000352393 GADD45BO75293 160 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-202ENST00000352393 RNF214Q8ND24 703 aa29.62■■■□□ 2.33
CPNE1-202ENST00000352393 USP48Q86UV5 1035 aa29.61■■■□□ 2.33
CPNE1-202ENST00000352393 DNAAF4Q8WXU2 420 aa29.61■■■□□ 2.33
CPNE1-202ENST00000352393 PHF14O94880 888 aa29.6■■■□□ 2.33
CPNE1-202ENST00000352393 GDPD2Q9HCC8 539 aa29.6■■■□□ 2.33
CPNE1-202ENST00000352393 CHPF2Q9P2E5 772 aa29.6■■■□□ 2.33
CPNE1-202ENST00000352393 EIF2S2P20042 333 aaKnown RBP29.59■■■□□ 2.33
CPNE1-202ENST00000352393 FER1L4A9Z1Z3 1794 aa29.59■■■□□ 2.33
CPNE1-202ENST00000352393 ADCY9O60503 1353 aa29.59■■■□□ 2.33
CPNE1-202ENST00000352393 HSP90AB4PQ58FF6 505 aa29.59■■■□□ 2.33
CPNE1-202ENST00000352393 PHRF1Q9P1Y6 1649 aaKnown RBP29.58■■■□□ 2.33
CPNE1-202ENST00000352393 RASEFQ8IZ41 740 aa29.58■■■□□ 2.33
CPNE1-202ENST00000352393 RGPD2P0DJD1 1756 aa29.58■■■□□ 2.33
CPNE1-202ENST00000352393 TTC41PQ6P2S7 1318 aa29.58■■■□□ 2.33
CPNE1-202ENST00000352393 KCNA6P17658 529 aa29.57■■■□□ 2.32
CPNE1-202ENST00000352393 AK2P54819 239 aa29.57■■■□□ 2.32
CPNE1-202ENST00000352393 PI4KAP2A4QPH2 592 aa29.57■■■□□ 2.32
CPNE1-202ENST00000352393 FOXD4L6Q3SYB3 417 aaPredicted RBP29.57■■■□□ 2.32
CPNE1-202ENST00000352393 FOXD4L3Q6VB84 417 aaPredicted RBP29.57■■■□□ 2.32
CPNE1-202ENST00000352393 PI4KAP1Q8N8J0 262 aa29.57■■■□□ 2.32
CPNE1-202ENST00000352393 IP6K1Q92551 441 aa29.57■■■□□ 2.32
CPNE1-202ENST00000352393 CHMP4AQ9BY43 222 aa29.57■■■□□ 2.32
CPNE1-202ENST00000352393 XPCQ01831 940 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-202ENST00000352393 RUFY3Q7L099 469 aa29.56■■■□□ 2.32
CPNE1-202ENST00000352393 MTX1Q13505 466 aa29.56■■■□□ 2.32
CPNE1-202ENST00000352393 LGR6Q9HBX8 967 aa29.56■■■□□ 2.32
CPNE1-202ENST00000352393 ZSCAN22P10073 491 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-202ENST00000352393 THEMISQ8N1K5 641 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-202ENST00000352393 LIMCH1Q9UPQ0 1083 aa29.55■■■□□ 2.32
CPNE1-202ENST00000352393 GLRX3O76003 335 aaKnown RBP29.54■■■□□ 2.32
CPNE1-202ENST00000352393 NBPF6Q5VWK0 638 aa29.53■■■□□ 2.32
CPNE1-202ENST00000352393 CWC27Q6UX04 472 aaKnown RBP29.53■■■□□ 2.32
CPNE1-202ENST00000352393 NBPF4Q96M43 638 aa29.53■■■□□ 2.32
CPNE1-202ENST00000352393 ADGRL3Q9HAR2 1447 aa29.52■■■□□ 2.32
CPNE1-202ENST00000352393 KCNQ3O43525 872 aa29.52■■■□□ 2.32
CPNE1-202ENST00000352393 CSPP1Q1MSJ5 1256 aa29.52■■■□□ 2.32
CPNE1-202ENST00000352393 FAM184AQ8NB25 1140 aa29.52■■■□□ 2.32
CPNE1-202ENST00000352393 CNPY2Q9Y2B0 182 aa29.52■■■□□ 2.32
CPNE1-202ENST00000352393 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.52■■■□□ 2.32
CPNE1-202ENST00000352393 GLIPR1L2Q4G1C9 344 aa29.51■■■□□ 2.32
CPNE1-202ENST00000352393 CCDC183Q5T5S1 534 aa29.51■■■□□ 2.32
CPNE1-202ENST00000352393 SPG7Q9UQ90 795 aa29.51■■■□□ 2.32
CPNE1-202ENST00000352393 R3HCC1Q9Y3T6 440 aaKnown RBP29.51■■■□□ 2.32
CPNE1-202ENST00000352393 CHD2O14647 1828 aaKnown RBP29.51■■■□□ 2.31
CPNE1-202ENST00000352393 STX6O43752 255 aa29.51■■■□□ 2.31
CPNE1-202ENST00000352393 SYT1P21579 422 aa29.5■■■□□ 2.31
CPNE1-202ENST00000352393 UVSSAQ2YD98 709 aa29.49■■■□□ 2.31
CPNE1-202ENST00000352393 DIAPH3Q9NSV4 1193 aa29.49■■■□□ 2.31
CPNE1-202ENST00000352393 SETD1BQ9UPS6 1966 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms