RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 DNAAF4Q8WXU2 420 aa8.64□□□□□ -1.03
TRIM55-203ENST00000350034 DDX21Q9NR30 783 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRIM55-203ENST00000350034 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
TRIM55-203ENST00000350034 ZBTB47Q9UFB7 747 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-203ENST00000350034 VIRMAQ69YN4 1812 aaKnown RBP8.64□□□□□ -1.03
TRIM55-203ENST00000350034 PCDH11XQ9BZA7 1347 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 PCDH11YQ9BZA8 1340 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 PRAMEF22A3QJZ6 481 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 ALDH1L1O75891 902 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 IL2RBP14784 551 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 RXRBP28702 533 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 SLC39A6Q13433 755 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 PROSER3Q2NL68 480 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
TRIM55-203ENST00000350034 KSR2Q6VAB6 950 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 LRP10Q7Z4F1 713 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 ZNF496Q96IT1 587 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-203ENST00000350034 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
TRIM55-203ENST00000350034 COL22A1Q8NFW1 1626 aaPredicted RBP8.62□□□□□ -1.03
TRIM55-203ENST00000350034 PI4KAP2A4QPH2 592 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 ERVV-2B6SEH9 535 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 ANXA1P04083 346 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 POLA2Q14181 598 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 PI4KAP1Q8N8J0 262 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 SSH3Q8TE77 659 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 TBC1D32Q96NH3 1257 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 DISP2A7MBM2 1401 aa8.62□□□□□ -1.03
TRIM55-203ENST00000350034 GLI3P10071 1580 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 UTYO14607 1347 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 PNMA6EA0A0J9YXQ4 647 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
TRIM55-203ENST00000350034 UBTFL1P0CB47 393 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-203ENST00000350034 CABP4P57796 275 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 MTX1Q13505 466 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 OSBPL3Q9H4L5 887 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 LRRFIP2Q9Y608 721 aaKnown RBP8.61□□□□□ -1.03
TRIM55-203ENST00000350034 EP400Q96L91 3159 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 TNS2Q63HR2 1409 aa8.61□□□□□ -1.03
TRIM55-203ENST00000350034 ERBB4Q15303 1308 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 SALL3Q9BXA9 1300 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 ROBO1Q9Y6N7 1651 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 GSPT1P15170 499 aaKnown RBP8.6□□□□□ -1.03
TRIM55-203ENST00000350034 EVA1CP58658 441 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 TTC22Q5TAA0 569 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 C16orf71Q8IYS4 520 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-203ENST00000350034 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 MAP3K2Q9Y2U5 619 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 USP16Q9Y5T5 823 aa8.6□□□□□ -1.03
TRIM55-203ENST00000350034 LRP6O75581 1613 aa8.59□□□□□ -1.03
TRIM55-203ENST00000350034 COL14A1Q05707 1796 aaKnown RBP8.59□□□□□ -1.03
TRIM55-203ENST00000350034 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
TRIM55-203ENST00000350034 NBPF7P0C2Y1 421 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-203ENST00000350034 TTC5Q8N0Z6 440 aa8.59□□□□□ -1.03
TRIM55-203ENST00000350034 OTUD7AQ8TE49 926 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-203ENST00000350034 UPF2Q9HAU5 1272 aaKnown RBP8.59□□□□□ -1.03
TRIM55-203ENST00000350034 STRN4Q9NRL3 753 aa8.59□□□□□ -1.03
TRIM55-203ENST00000350034 C5P01031 1676 aa8.59□□□□□ -1.03
TRIM55-203ENST00000350034 COL16A1Q07092 1604 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-203ENST00000350034 SHANK3Q9BYB0 1731 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 SMARCA5O60264 1052 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-203ENST00000350034 RAB11FIP3O75154 756 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 RBM25P49756 843 aaKnown RBP8.58□□□□□ -1.04
TRIM55-203ENST00000350034 ERICH6Q7L0X2 663 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 PPP1R42Q7Z4L9 355 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 ZNF784Q8NCA9 323 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-203ENST00000350034 BTG4Q9NY30 223 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 STAP2Q9UGK3 403 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 HDAC5Q9UQL6 1122 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 KCPQ6ZWJ8 1503 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 PAPPAQ13219 1627 aa8.58□□□□□ -1.04
TRIM55-203ENST00000350034 CDC45O75419 566 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 IGKV5-2P06315 115 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 PDE1AP54750 535 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 TBC1D9Q6ZT07 1266 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 COPS6Q7L5N1 327 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
TRIM55-203ENST00000350034 C22orf23Q9BZE7 217 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 COL15A1P39059 1388 aa8.57□□□□□ -1.04
TRIM55-203ENST00000350034 AOX1Q06278 1338 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 NEURL1BA8MQ27 555 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 GRM8O00222 908 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 EIF5BO60841 1220 aaKnown RBP8.56□□□□□ -1.04
TRIM55-203ENST00000350034 MFAP1P55081 439 aaKnown RBP8.56□□□□□ -1.04
TRIM55-203ENST00000350034 CWF19L2Q2TBE0 894 aaKnown RBP8.56□□□□□ -1.04
TRIM55-203ENST00000350034 NBPF14Q5TI25 921 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
TRIM55-203ENST00000350034 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
TRIM55-203ENST00000350034 KAZALD1Q96I82 304 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 UBR2Q8IWV8 1755 aa8.56□□□□□ -1.04
TRIM55-203ENST00000350034 SRGAP3O43295 1099 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 CAPN15O75808 1086 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 SDSP20132 328 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms