RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 EXOC6BQ9Y2D4 811 aa20.63■□□□□ 0.89
SAMM50-201ENST00000350028 ALDH1L1O75891 902 aa20.62■□□□□ 0.89
SAMM50-201ENST00000350028 KSR2Q6VAB6 950 aa20.62■□□□□ 0.89
SAMM50-201ENST00000350028 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
SAMM50-201ENST00000350028 AHDC1Q5TGY3 1603 aaPredicted RBP20.62■□□□□ 0.89
SAMM50-201ENST00000350028 UBAP1LF5GYI3 381 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 ANXA1P04083 346 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 PDE1AP54750 535 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 CASC1Q6TDU7 716 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 SNX21Q969T3 373 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
SAMM50-201ENST00000350028 HDAC5Q9UQL6 1122 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 TOM1O60784 492 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 RAB11FIP3O75154 756 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 SDSP20132 328 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 POLA2Q14181 598 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
SAMM50-201ENST00000350028 MRC1P22897 1456 aa20.6■□□□□ 0.89
SAMM50-201ENST00000350028 DDX58O95786 925 aaKnown RBP20.6■□□□□ 0.89
SAMM50-201ENST00000350028 PIP4K2BP78356 416 aa20.6■□□□□ 0.89
SAMM50-201ENST00000350028 HSCBQ8IWL3 235 aa20.6■□□□□ 0.89
SAMM50-201ENST00000350028 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
SAMM50-201ENST00000350028 SALL3Q9BXA9 1300 aa20.59■□□□□ 0.89
SAMM50-201ENST00000350028 CYP27B1O15528 508 aa20.58■□□□□ 0.89
SAMM50-201ENST00000350028 PPP1R42Q7Z4L9 355 aa20.58■□□□□ 0.89
SAMM50-201ENST00000350028 ANTXR1Q9H6X2 564 aa20.58■□□□□ 0.89
SAMM50-201ENST00000350028 PRDM11Q9NQV5 511 aa20.58■□□□□ 0.89
SAMM50-201ENST00000350028 MAP3K2Q9Y2U5 619 aa20.58■□□□□ 0.89
SAMM50-201ENST00000350028 WDR17Q8IZU2 1322 aa20.58■□□□□ 0.89
SAMM50-201ENST00000350028 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.88
SAMM50-201ENST00000350028 PROSER3Q2NL68 480 aa20.58■□□□□ 0.88
SAMM50-201ENST00000350028 NBPF7P0C2Y1 421 aaPredicted RBP20.57■□□□□ 0.88
SAMM50-201ENST00000350028 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
SAMM50-201ENST00000350028 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
SAMM50-201ENST00000350028 PARP4Q9UKK3 1724 aaKnown RBP20.56■□□□□ 0.88
SAMM50-201ENST00000350028 PDIA6Q15084 440 aa20.56■□□□□ 0.88
SAMM50-201ENST00000350028 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
SAMM50-201ENST00000350028 HSP90AB4PQ58FF6 505 aa20.56■□□□□ 0.88
SAMM50-201ENST00000350028 KIF2CQ99661 725 aa20.56■□□□□ 0.88
SAMM50-201ENST00000350028 AOX1Q06278 1338 aa20.55■□□□□ 0.88
SAMM50-201ENST00000350028 COL16A1Q07092 1604 aaPredicted RBP20.55■□□□□ 0.88
SAMM50-201ENST00000350028 MX1P20591 662 aa20.55■□□□□ 0.88
SAMM50-201ENST00000350028 DEKP35659 375 aaKnown RBP20.55■□□□□ 0.88
SAMM50-201ENST00000350028 TTC5Q8N0Z6 440 aa20.55■□□□□ 0.88
SAMM50-201ENST00000350028 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
SAMM50-201ENST00000350028 C5P01031 1676 aa20.55■□□□□ 0.88
SAMM50-201ENST00000350028 PHLPP1O60346 1717 aa20.54■□□□□ 0.88
SAMM50-201ENST00000350028 SRGAP3O43295 1099 aa20.54■□□□□ 0.88
SAMM50-201ENST00000350028 SURF6O75683 361 aaKnown RBP20.54■□□□□ 0.88
SAMM50-201ENST00000350028 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
SAMM50-201ENST00000350028 MTX1Q13505 466 aa20.54■□□□□ 0.88
SAMM50-201ENST00000350028 C9orf78Q9NZ63 289 aaPredicted RBP20.54■□□□□ 0.88
SAMM50-201ENST00000350028 CABP4P57796 275 aa20.53■□□□□ 0.88
SAMM50-201ENST00000350028 TOM1L2Q6ZVM7 507 aa20.53■□□□□ 0.88
SAMM50-201ENST00000350028 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
SAMM50-201ENST00000350028 FMNL2Q96PY5 1086 aa20.53■□□□□ 0.88
SAMM50-201ENST00000350028 USP26Q9BXU7 913 aa20.53■□□□□ 0.88
SAMM50-201ENST00000350028 ABCA3Q99758 1704 aa20.53■□□□□ 0.88
SAMM50-201ENST00000350028 COL5A2P05997 1499 aaPredicted RBP20.52■□□□□ 0.88
SAMM50-201ENST00000350028 REC8O95072 547 aa20.52■□□□□ 0.88
SAMM50-201ENST00000350028 LARP1Q6PKG0 1096 aaKnown RBP20.52■□□□□ 0.88
SAMM50-201ENST00000350028 ZCRB1Q8TBF4 217 aaKnown RBP20.52■□□□□ 0.88
SAMM50-201ENST00000350028 KIF1BPQ96EK5 621 aa20.52■□□□□ 0.88
SAMM50-201ENST00000350028 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.87
SAMM50-201ENST00000350028 UTYO14607 1347 aa20.51■□□□□ 0.87
SAMM50-201ENST00000350028 PCDH11XQ9BZA7 1347 aa20.51■□□□□ 0.87
SAMM50-201ENST00000350028 PCDH11YQ9BZA8 1340 aa20.51■□□□□ 0.87
SAMM50-201ENST00000350028 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
SAMM50-201ENST00000350028 CARD10Q9BWT7 1032 aa20.51■□□□□ 0.87
SAMM50-201ENST00000350028 ERC2O15083 957 aa20.5■□□□□ 0.87
SAMM50-201ENST00000350028 CHMP5Q9NZZ3 219 aa20.5■□□□□ 0.87
SAMM50-201ENST00000350028 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
SAMM50-201ENST00000350028 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
SAMM50-201ENST00000350028 RIC3Q7Z5B4 369 aa20.5■□□□□ 0.87
SAMM50-201ENST00000350028 GRM8O00222 908 aa20.49■□□□□ 0.87
SAMM50-201ENST00000350028 RABEP1Q15276 862 aa20.49■□□□□ 0.87
SAMM50-201ENST00000350028 NEXNQ0ZGT2 675 aa20.48■□□□□ 0.87
SAMM50-201ENST00000350028 CWF19L2Q2TBE0 894 aaKnown RBP20.48■□□□□ 0.87
SAMM50-201ENST00000350028 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 IL2RBP14784 551 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 NKX1-1Q15270 411 aaPredicted RBP20.47■□□□□ 0.87
SAMM50-201ENST00000350028 XAGE3Q8WTP9 111 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 IL1RAPL2Q9NP60 686 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 MYL6BP14649 208 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
SAMM50-201ENST00000350028 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
SAMM50-201ENST00000350028 COL22A1Q8NFW1 1626 aaPredicted RBP20.46■□□□□ 0.87
SAMM50-201ENST00000350028 EVA1CP58658 441 aa20.46■□□□□ 0.87
SAMM50-201ENST00000350028 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
SAMM50-201ENST00000350028 TSHZ3Q63HK5 1081 aa20.45■□□□□ 0.86
SAMM50-201ENST00000350028 LRP10Q7Z4F1 713 aa20.45■□□□□ 0.86
SAMM50-201ENST00000350028 ERC1Q8IUD2 1116 aa20.45■□□□□ 0.86
SAMM50-201ENST00000350028 ERBB4Q15303 1308 aa20.45■□□□□ 0.86
SAMM50-201ENST00000350028 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
SAMM50-201ENST00000350028 K7ELQ4 463 aaPredicted RBP20.44■□□□□ 0.86
SAMM50-201ENST00000350028 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
SAMM50-201ENST00000350028 ANKRD13DQ6ZTN6 518 aa20.44■□□□□ 0.86
SAMM50-201ENST00000350028 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms