RNA–Protein interactions for RNA: ENST00000349607.8

MUC4-204, Transcript of mucin 4, cell surface associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MUC4, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-204ENST00000349607 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
MUC4-204ENST00000349607 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
MUC4-204ENST00000349607 KIF2CQ99661 725 aa13.42□□□□□ -0.26
MUC4-204ENST00000349607 LTKP29376 864 aa13.42□□□□□ -0.26
MUC4-204ENST00000349607 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
MUC4-204ENST00000349607 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
MUC4-204ENST00000349607 GLI2P10070 1586 aa13.42□□□□□ -0.26
MUC4-204ENST00000349607 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
MUC4-204ENST00000349607 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 LMBRD1Q9NUN5 540 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 CEP152O94986 1710 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 GLRX3O76003 335 aaKnown RBP13.41□□□□□ -0.26
MUC4-204ENST00000349607 CBX1P83916 185 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 CAMK4Q16566 473 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 CGNQ9P2M7 1197 aaKnown RBP13.41□□□□□ -0.26
MUC4-204ENST00000349607 FAM135BQ49AJ0 1406 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
MUC4-204ENST00000349607 MAP3K2Q9Y2U5 619 aa13.41□□□□□ -0.26
MUC4-204ENST00000349607 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
MUC4-204ENST00000349607 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 PIK3R4Q99570 1358 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 NBPF7P0C2Y1 421 aaPredicted RBP13.4□□□□□ -0.26
MUC4-204ENST00000349607 UNC5CLQ8IV45 518 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
MUC4-204ENST00000349607 KDM4AO75164 1064 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
MUC4-204ENST00000349607 ARAP3Q8WWN8 1544 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
MUC4-204ENST00000349607 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 FLT4P35916 1363 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
MUC4-204ENST00000349607 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 TMEM63CQ9P1W3 806 aa13.39□□□□□ -0.27
MUC4-204ENST00000349607 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
MUC4-204ENST00000349607 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
MUC4-204ENST00000349607 SF3A1Q15459 793 aaKnown RBP13.38□□□□□ -0.27
MUC4-204ENST00000349607 BLOC1S2Q6QNY1 142 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 KCNA6P17658 529 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 HOXC9P31274 260 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
MUC4-204ENST00000349607 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 IL17REQ8NFR9 667 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
MUC4-204ENST00000349607 STX6O43752 255 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 PSMA5P28066 241 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
MUC4-204ENST00000349607 GJB2P29033 226 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 BECN2A8MW95 431 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 KCNQ3O43525 872 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 ZNF771Q7L3S4 317 aaPredicted RBP13.37□□□□□ -0.27
MUC4-204ENST00000349607 DHX37Q8IY37 1157 aaKnown RBP13.37□□□□□ -0.27
MUC4-204ENST00000349607 USP44Q9H0E7 712 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 ECHDC1Q9NTX5 307 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
MUC4-204ENST00000349607 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 AK2P54819 239 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
MUC4-204ENST00000349607 GADD45BO75293 160 aaPredicted RBP13.36□□□□□ -0.27
MUC4-204ENST00000349607 NEO1Q92859 1461 aa13.36□□□□□ -0.27
MUC4-204ENST00000349607 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
MUC4-204ENST00000349607 TTC21AQ8NDW8 1320 aa13.36□□□□□ -0.27
MUC4-204ENST00000349607 HECW2Q9P2P5 1572 aa13.36□□□□□ -0.27
MUC4-204ENST00000349607 INO80Q9ULG1 1556 aaPredicted RBP13.36□□□□□ -0.27
MUC4-204ENST00000349607 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
MUC4-204ENST00000349607 GPT2Q8TD30 523 aa13.36□□□□□ -0.27
MUC4-204ENST00000349607 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
MUC4-204ENST00000349607 SOS1Q07889 1333 aaPredicted RBP13.36□□□□□ -0.27
MUC4-204ENST00000349607 MYD88Q99836 296 aa13.35□□□□□ -0.27
MUC4-204ENST00000349607 ADGRB1O14514 1584 aa13.35□□□□□ -0.27
MUC4-204ENST00000349607 KRT85P78386 507 aa13.35□□□□□ -0.27
MUC4-204ENST00000349607 ROBO2Q9HCK4 1378 aa13.35□□□□□ -0.27
MUC4-204ENST00000349607 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
MUC4-204ENST00000349607 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
MUC4-204ENST00000349607 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
MUC4-204ENST00000349607 DNM1Q05193 864 aaKnown RBP13.34□□□□□ -0.27
MUC4-204ENST00000349607 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
MUC4-204ENST00000349607 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 PTCH1Q13635 1447 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 WASHC4Q2M389 1173 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 CCDC183Q5T5S1 534 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
MUC4-204ENST00000349607 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
MUC4-204ENST00000349607 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms