RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC6B-202ENST00000347691 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
TRAPPC6B-202ENST00000347691 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 SSH3Q8TE77 659 aa12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 SMAP1Q8IYB5 467 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 UPF3BQ9BZI7 483 aaKnown RBP12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
TRAPPC6B-202ENST00000347691 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 SGSM2O43147 1006 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 STX6O43752 255 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 TSHZ3Q63HK5 1081 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 GADD45BO75293 160 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
TRAPPC6B-202ENST00000347691 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.47
TRAPPC6B-202ENST00000347691 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SH2B1Q9NRF2 756 aaPredicted RBP12.15□□□□□ -0.47
TRAPPC6B-202ENST00000347691 PTPRUQ92729 1446 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 ADCY5O95622 1261 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TCHHQ07283 1943 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 F13A1P00488 732 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TTC14Q96N46 770 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SPTLC3Q9NUV7 552 aa12.14□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TTC41PQ6P2S7 1318 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 ROBO2Q9HCK4 1378 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 KDM4AO75164 1064 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 AMPHP49418 695 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 POLA2Q14181 598 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 USP44Q9H0E7 712 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 HDAC5Q9UQL6 1122 aa12.13□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 USP42Q9H9J4 1324 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 FOXO3O43524 673 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SYT1P21579 422 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 UNC5CLQ8IV45 518 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TM6SF1Q9BZW5 370 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 LSG1Q9H089 658 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TMEM2Q9UHN6 1383 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CRYBG1Q9Y4K1 1723 aa12.12□□□□□ -0.47
TRAPPC6B-202ENST00000347691 GLRX3O76003 335 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 AK2P54819 239 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 VPS53Q5VIR6 699 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 HOXB7P09629 217 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 HCLS1P14317 486 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 EYA1Q99502 592 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 KIF3AQ9Y496 699 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 TNRQ92752 1358 aa12.11□□□□□ -0.47
TRAPPC6B-202ENST00000347691 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 PPP1R42Q7Z4L9 355 aa12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CHD2O14647 1828 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 NUTM1Q86Y26 1132 aa12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CEP170BQ9Y4F5 1589 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-202ENST00000347691 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 PDCP20941 246 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 HDGFL1Q5TGJ6 251 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CYP46A1Q9Y6A2 500 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 HIP1O00291 1037 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 FIBPO43427 364 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 RUFY3Q7L099 469 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 CCDC171Q6TFL3 1326 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
TRAPPC6B-202ENST00000347691 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ZKSCAN1P17029 563 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PDRG1Q9NUG6 133 aa12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 DIP2BQ9P265 1576 aa12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 KCNB2Q92953 911 aa12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
TRAPPC6B-202ENST00000347691 GJB2P29033 226 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms