RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
R3HDM2-201ENST00000347140 SRGAP3O43295 1099 aa18.52■□□□□ 0.56
R3HDM2-201ENST00000347140 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.56
R3HDM2-201ENST00000347140 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
R3HDM2-201ENST00000347140 EDC4Q6P2E9 1401 aaKnown RBP18.52■□□□□ 0.56
R3HDM2-201ENST00000347140 ATP10DQ9P241 1426 aa18.52■□□□□ 0.55
R3HDM2-201ENST00000347140 NRDCO43847 1150 aa18.52■□□□□ 0.55
R3HDM2-201ENST00000347140 UTP14CQ5TAP6 766 aaKnown RBP18.51■□□□□ 0.55
R3HDM2-201ENST00000347140 SH2B1Q9NRF2 756 aaPredicted RBP18.51■□□□□ 0.55
R3HDM2-201ENST00000347140 BECN2A8MW95 431 aa18.51■□□□□ 0.55
R3HDM2-201ENST00000347140 PPLO60437 1756 aa18.51■□□□□ 0.55
R3HDM2-201ENST00000347140 HSPA4P34932 840 aa18.51■□□□□ 0.55
R3HDM2-201ENST00000347140 FAM200AQ8TCP9 573 aa18.51■□□□□ 0.55
R3HDM2-201ENST00000347140 KIF1BPQ96EK5 621 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 ABCC3O15438 1527 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 H3BQV1 296 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 PRPF40BQ6NWY9 871 aaKnown RBP18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 CKAP2LQ8IYA6 745 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 PRDM4Q9UKN5 801 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 MROH1Q8NDA8 1641 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 IFT172Q9UG01 1749 aa18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 CPSF1Q10570 1443 aaKnown RBP18.5■□□□□ 0.55
R3HDM2-201ENST00000347140 TNNT1P13805 278 aa18.49■□□□□ 0.55
R3HDM2-201ENST00000347140 HSP90B1P14625 803 aaKnown RBP18.49■□□□□ 0.55
R3HDM2-201ENST00000347140 PTGS1P23219 599 aa18.49■□□□□ 0.55
R3HDM2-201ENST00000347140 PSMA5P28066 241 aa18.49■□□□□ 0.55
R3HDM2-201ENST00000347140 RNF20Q5VTR2 975 aa18.49■□□□□ 0.55
R3HDM2-201ENST00000347140 SPATA32Q96LK8 384 aa18.49■□□□□ 0.55
R3HDM2-201ENST00000347140 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 CCDC186Q7Z3E2 898 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 DDX54Q8TDD1 881 aaKnown RBP18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 CAMSAP1Q5T5Y3 1602 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 U2AF2P26368 475 aaKnown RBP eCLIP18.48■□□□□ 0.551e-6■■■□□ 17.3
R3HDM2-201ENST00000347140 HSP90AB2PQ58FF8 381 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 KIF20AO95235 890 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 NAP1L2Q9ULW6 460 aaPredicted RBP18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
R3HDM2-201ENST00000347140 RAD50Q92878 1312 aa18.47■□□□□ 0.55
R3HDM2-201ENST00000347140 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
R3HDM2-201ENST00000347140 PPP1R42Q7Z4L9 355 aa18.47■□□□□ 0.55
R3HDM2-201ENST00000347140 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
R3HDM2-201ENST00000347140 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
R3HDM2-201ENST00000347140 PYCARDQ9ULZ3 195 aa18.47■□□□□ 0.55
R3HDM2-201ENST00000347140 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 GLRX3O76003 335 aaKnown RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 CGNQ9P2M7 1197 aaKnown RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 HDAC5Q9UQL6 1122 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 ATP7BP35670 1465 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 CPA1P15085 419 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 AOX1Q06278 1338 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 KIAA1524Q8TCG1 905 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
R3HDM2-201ENST00000347140 SGSM2O43147 1006 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 FOXO3O43524 673 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 IGSF3O75054 1194 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 TYRO3Q06418 890 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 SCAND2PQ9GZW5 306 aaPredicted RBP18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 FEZ1Q99689 392 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 SPTLC3Q9NUV7 552 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 STAP2Q9UGK3 403 aa18.45■□□□□ 0.54
R3HDM2-201ENST00000347140 ABCA9Q8IUA7 1624 aa18.44■□□□□ 0.54
R3HDM2-201ENST00000347140 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
R3HDM2-201ENST00000347140 CLIP2Q9UDT6 1046 aa18.44■□□□□ 0.54
R3HDM2-201ENST00000347140 ANO6Q4KMQ2 910 aa18.44■□□□□ 0.54
R3HDM2-201ENST00000347140 LUZP1Q86V48 1076 aa18.44■□□□□ 0.54
R3HDM2-201ENST00000347140 DDX19AQ9NUU7 478 aaKnown RBP18.44■□□□□ 0.54
R3HDM2-201ENST00000347140 GTF2F1P35269 517 aaKnown RBP eCLIP18.43■□□□□ 0.547e-13■■■□□ 15.9
R3HDM2-201ENST00000347140 TAF3Q5VWG9 929 aa18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 TTC21BQ7Z4L5 1316 aa18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 DTNBO60941 627 aa18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 ANKRD1Q15327 319 aa18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 MTHFSDQ2M296 383 aaKnown RBP18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 TFIP11Q9UBB9 837 aaKnown RBP18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 PAXBP1Q9Y5B6 917 aa18.43■□□□□ 0.54
R3HDM2-201ENST00000347140 SMTNL1A8MU46 457 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 STK3Q13188 491 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 PTPRMP28827 1452 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 DACT1Q9NYF0 836 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 ZNF165P49910 485 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 OGFRQ9NZT2 677 aa18.42■□□□□ 0.54
R3HDM2-201ENST00000347140 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms