RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 SPDYE2BA6NHP3 402 aa15.91■□□□□ 0.14
TUBD1-203ENST00000346141 SPDYE6P0CI01 402 aa15.91■□□□□ 0.14
TUBD1-203ENST00000346141 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
TUBD1-203ENST00000346141 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
TUBD1-203ENST00000346141 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
TUBD1-203ENST00000346141 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
TUBD1-203ENST00000346141 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
TUBD1-203ENST00000346141 C4AP0C0L4 1744 aa15.9■□□□□ 0.14
TUBD1-203ENST00000346141 FCHSD2O94868 740 aa15.9■□□□□ 0.14
TUBD1-203ENST00000346141 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
TUBD1-203ENST00000346141 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
TUBD1-203ENST00000346141 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
TUBD1-203ENST00000346141 PARP3Q9Y6F1 533 aa15.89■□□□□ 0.13
TUBD1-203ENST00000346141 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
TUBD1-203ENST00000346141 C10orf71Q711Q0 1435 aa15.89■□□□□ 0.13
TUBD1-203ENST00000346141 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
TUBD1-203ENST00000346141 UBR2Q8IWV8 1755 aa15.88■□□□□ 0.13
TUBD1-203ENST00000346141 ZPR1O75312 459 aa15.87■□□□□ 0.13
TUBD1-203ENST00000346141 TGFB2P61812 414 aa15.87■□□□□ 0.13
TUBD1-203ENST00000346141 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
TUBD1-203ENST00000346141 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
TUBD1-203ENST00000346141 KIF13BQ9NQT8 1826 aa15.86■□□□□ 0.13
TUBD1-203ENST00000346141 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
TUBD1-203ENST00000346141 STARD3NLO95772 234 aa15.86■□□□□ 0.13
TUBD1-203ENST00000346141 COL15A1P39059 1388 aa15.85■□□□□ 0.13
TUBD1-203ENST00000346141 FKBP8Q14318 412 aa15.85■□□□□ 0.13
TUBD1-203ENST00000346141 ZNF496Q96IT1 587 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-203ENST00000346141 TEX13AQ9BXU3 409 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-203ENST00000346141 ZBTB1Q9Y2K1 713 aa15.85■□□□□ 0.13
TUBD1-203ENST00000346141 HEG1Q9ULI3 1381 aa15.85■□□□□ 0.13
TUBD1-203ENST00000346141 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-203ENST00000346141 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
TUBD1-203ENST00000346141 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
TUBD1-203ENST00000346141 USPL1Q5W0Q7 1092 aa15.84■□□□□ 0.13
TUBD1-203ENST00000346141 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
TUBD1-203ENST00000346141 BTBD11A6QL63 1104 aa15.83■□□□□ 0.12
TUBD1-203ENST00000346141 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.12
TUBD1-203ENST00000346141 NEFMP07197 916 aa15.83■□□□□ 0.12
TUBD1-203ENST00000346141 DDR1Q08345 913 aa15.83■□□□□ 0.12
TUBD1-203ENST00000346141 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.12
TUBD1-203ENST00000346141 A0A087WZG4 1122 aa15.82■□□□□ 0.12
TUBD1-203ENST00000346141 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
TUBD1-203ENST00000346141 TM4SF1P30408 202 aa15.82■□□□□ 0.12
TUBD1-203ENST00000346141 KIAA1551Q9HCM1 1747 aa15.81■□□□□ 0.12
TUBD1-203ENST00000346141 A0A0G2JLW4 131 aa15.81■□□□□ 0.12
TUBD1-203ENST00000346141 POLRMTO00411 1230 aaKnown RBP15.81■□□□□ 0.12
TUBD1-203ENST00000346141 EIF5P55010 431 aaKnown RBP15.81■□□□□ 0.12
TUBD1-203ENST00000346141 DPEP1P16444 411 aa15.8■□□□□ 0.12
TUBD1-203ENST00000346141 RALBP1Q15311 655 aa15.8■□□□□ 0.12
TUBD1-203ENST00000346141 MCM10Q7L590 875 aa15.8■□□□□ 0.12
TUBD1-203ENST00000346141 BCS1LQ9Y276 419 aa15.79■□□□□ 0.12
TUBD1-203ENST00000346141 N4BP2Q86UW6 1770 aaPredicted RBP15.79■□□□□ 0.12
TUBD1-203ENST00000346141 ATP10DQ9P241 1426 aa15.79■□□□□ 0.12
TUBD1-203ENST00000346141 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
TUBD1-203ENST00000346141 NFIXQ14938 502 aa15.78■□□□□ 0.12
TUBD1-203ENST00000346141 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
TUBD1-203ENST00000346141 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
TUBD1-203ENST00000346141 ADCY9O60503 1353 aa15.78■□□□□ 0.12
TUBD1-203ENST00000346141 KCNQ3O43525 872 aa15.78■□□□□ 0.12
TUBD1-203ENST00000346141 GIGYF1O75420 1035 aaPredicted RBP15.78■□□□□ 0.12
TUBD1-203ENST00000346141 NPM2Q86SE8 214 aaKnown RBP15.78■□□□□ 0.12
TUBD1-203ENST00000346141 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
TUBD1-203ENST00000346141 KCNA3P22001 575 aa15.77■□□□□ 0.11
TUBD1-203ENST00000346141 DCTN1Q14203 1278 aa15.77■□□□□ 0.11
TUBD1-203ENST00000346141 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.11
TUBD1-203ENST00000346141 PLEKHF1Q96S99 279 aa15.77■□□□□ 0.11
TUBD1-203ENST00000346141 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.11
TUBD1-203ENST00000346141 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
TUBD1-203ENST00000346141 TAF7Q15545 349 aaPredicted RBP15.76■□□□□ 0.11
TUBD1-203ENST00000346141 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
TUBD1-203ENST00000346141 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
TUBD1-203ENST00000346141 A1BGP04217 495 aa15.75■□□□□ 0.11
TUBD1-203ENST00000346141 SERPINB2P05120 415 aa15.75■□□□□ 0.11
TUBD1-203ENST00000346141 C1QTNF8P60827 252 aa15.75■□□□□ 0.11
TUBD1-203ENST00000346141 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
TUBD1-203ENST00000346141 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
TUBD1-203ENST00000346141 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
TUBD1-203ENST00000346141 NFE2L2Q16236 605 aa15.74■□□□□ 0.11
TUBD1-203ENST00000346141 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
TUBD1-203ENST00000346141 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
TUBD1-203ENST00000346141 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
TUBD1-203ENST00000346141 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
TUBD1-203ENST00000346141 CHRNA5P30532 468 aa15.73■□□□□ 0.11
TUBD1-203ENST00000346141 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
TUBD1-203ENST00000346141 GPBP1L1Q9HC44 474 aaPredicted RBP15.73■□□□□ 0.11
TUBD1-203ENST00000346141 TBC1D2BQ9UPU7 963 aa15.73■□□□□ 0.11
TUBD1-203ENST00000346141 BICDL1Q6ZP65 573 aa15.72■□□□□ 0.11
TUBD1-203ENST00000346141 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
TUBD1-203ENST00000346141 CARMIL3Q8ND23 1372 aa15.72■□□□□ 0.11
TUBD1-203ENST00000346141 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
TUBD1-203ENST00000346141 TBC1D9BQ66K14 1250 aa15.71■□□□□ 0.11
TUBD1-203ENST00000346141 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
TUBD1-203ENST00000346141 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.11
TUBD1-203ENST00000346141 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
TUBD1-203ENST00000346141 CAMTA2O94983 1202 aa15.71■□□□□ 0.1
TUBD1-203ENST00000346141 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
TUBD1-203ENST00000346141 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
TUBD1-203ENST00000346141 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
TUBD1-203ENST00000346141 RGL2O15211 777 aa15.69■□□□□ 0.1
TUBD1-203ENST00000346141 CLEC4GQ6UXB4 293 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms