RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 CDCA7Q9BWT1 371 aaPredicted RBP31.53■■■□□ 2.64
TRADD-201ENST00000345057 KSR2Q6VAB6 950 aa31.52■■■□□ 2.64
TRADD-201ENST00000345057 ZBTB47Q9UFB7 747 aaPredicted RBP31.52■■■□□ 2.64
TRADD-201ENST00000345057 PRAMEF22A3QJZ6 481 aa31.52■■■□□ 2.64
TRADD-201ENST00000345057 UBTFL1P0CB47 393 aaPredicted RBP31.5■■■□□ 2.63
TRADD-201ENST00000345057 LNPKQ9C0E8 428 aa31.5■■■□□ 2.63
TRADD-201ENST00000345057 BEND3Q5T5X7 828 aa31.5■■■□□ 2.63
TRADD-201ENST00000345057 THRAP3Q9Y2W1 955 aaKnown RBP31.5■■■□□ 2.63
TRADD-201ENST00000345057 ADCY9O60503 1353 aa31.5■■■□□ 2.63
TRADD-201ENST00000345057 LAMB4A4D0S4 1761 aa31.5■■■□□ 2.63
TRADD-201ENST00000345057 ANXA1P04083 346 aa31.49■■■□□ 2.63
TRADD-201ENST00000345057 HDAC5Q9UQL6 1122 aa31.49■■■□□ 2.63
TRADD-201ENST00000345057 PAPPAQ13219 1627 aa31.49■■■□□ 2.63
TRADD-201ENST00000345057 ERBB4Q15303 1308 aa31.49■■■□□ 2.63
TRADD-201ENST00000345057 USP44Q9H0E7 712 aa31.48■■■□□ 2.63
TRADD-201ENST00000345057 ALDH1L1O75891 902 aa31.48■■■□□ 2.63
TRADD-201ENST00000345057 ADAMTS2O95450 1211 aa31.48■■■□□ 2.63
TRADD-201ENST00000345057 PDIA6Q15084 440 aa31.48■■■□□ 2.63
TRADD-201ENST00000345057 UBR2Q8IWV8 1755 aa31.48■■■□□ 2.63
TRADD-201ENST00000345057 PROSER3Q2NL68 480 aa31.47■■■□□ 2.63
TRADD-201ENST00000345057 WNK3Q9BYP7 1800 aa31.46■■■□□ 2.63
TRADD-201ENST00000345057 NRAPQ86VF7 1730 aa31.46■■■□□ 2.63
TRADD-201ENST00000345057 NWD2Q9ULI1 1742 aa31.46■■■□□ 2.63
TRADD-201ENST00000345057 MAP3K2Q9Y2U5 619 aa31.46■■■□□ 2.63
TRADD-201ENST00000345057 IBTKQ9P2D0 1353 aaPredicted RBP31.45■■■□□ 2.63
TRADD-201ENST00000345057 EXOC5O00471 708 aa31.45■■■□□ 2.63
TRADD-201ENST00000345057 TMOD3Q9NYL9 352 aa31.45■■■□□ 2.63
TRADD-201ENST00000345057 LRP6O75581 1613 aa31.44■■■□□ 2.62
TRADD-201ENST00000345057 TNS2Q63HR2 1409 aa31.44■■■□□ 2.62
TRADD-201ENST00000345057 ATP8B2P98198 1209 aa31.43■■■□□ 2.62
TRADD-201ENST00000345057 GLI3P10071 1580 aa31.43■■■□□ 2.62
TRADD-201ENST00000345057 USP16Q9Y5T5 823 aa31.42■■■□□ 2.62
TRADD-201ENST00000345057 LRRFIP2Q9Y608 721 aaKnown RBP31.42■■■□□ 2.62
TRADD-201ENST00000345057 KCPQ6ZWJ8 1503 aa31.41■■■□□ 2.62
TRADD-201ENST00000345057 LINS1Q8NG48 757 aa31.41■■■□□ 2.62
TRADD-201ENST00000345057 SPATA31A1Q5TZJ5 1347 aa31.41■■■□□ 2.62
TRADD-201ENST00000345057 TOGARAM1Q9Y4F4 1720 aa31.41■■■□□ 2.62
TRADD-201ENST00000345057 NUTM2BA6NNL0 878 aaPredicted RBP31.4■■■□□ 2.62
TRADD-201ENST00000345057 NUTM2EB1AL46 878 aaPredicted RBP31.4■■■□□ 2.62
TRADD-201ENST00000345057 NUTM2AQ8IVF1 878 aaPredicted RBP31.4■■■□□ 2.62
TRADD-201ENST00000345057 RIC3Q7Z5B4 369 aa31.4■■■□□ 2.62
TRADD-201ENST00000345057 JCADQ9P266 1359 aa31.39■■■□□ 2.62
TRADD-201ENST00000345057 MYL6BP14649 208 aa31.39■■■□□ 2.62
TRADD-201ENST00000345057 NEXNQ0ZGT2 675 aa31.39■■■□□ 2.62
TRADD-201ENST00000345057 SLIT2O94813 1529 aa31.39■■■□□ 2.62
TRADD-201ENST00000345057 AIMP1Q12904 312 aaKnown RBP31.38■■■□□ 2.61
TRADD-201ENST00000345057 NPM2Q86SE8 214 aaKnown RBP31.38■■■□□ 2.61
TRADD-201ENST00000345057 BMP2KLQ5H9B9 411 aa31.37■■■□□ 2.61
TRADD-201ENST00000345057 XAGE3Q8WTP9 111 aa31.37■■■□□ 2.61
TRADD-201ENST00000345057 COPS6Q7L5N1 327 aa31.35■■■□□ 2.61
TRADD-201ENST00000345057 IPO9Q96P70 1041 aaKnown RBP31.35■■■□□ 2.61
TRADD-201ENST00000345057 TEX13AQ9BXU3 409 aaPredicted RBP31.35■■■□□ 2.61
TRADD-201ENST00000345057 UPF2Q9HAU5 1272 aaKnown RBP31.35■■■□□ 2.61
TRADD-201ENST00000345057 C9orf78Q9NZ63 289 aaPredicted RBP31.35■■■□□ 2.61
TRADD-201ENST00000345057 LRP10Q7Z4F1 713 aa31.35■■■□□ 2.61
TRADD-201ENST00000345057 VSIG10Q8N0Z9 540 aa31.35■■■□□ 2.61
TRADD-201ENST00000345057 ANKRD13DQ6ZTN6 518 aa31.34■■■□□ 2.61
TRADD-201ENST00000345057 SPATA31A5Q5VU36 1347 aa31.34■■■□□ 2.61
TRADD-201ENST00000345057 SPATA31A7Q8IWB4 1347 aa31.34■■■□□ 2.61
TRADD-201ENST00000345057 SSH3Q8TE77 659 aa31.33■■■□□ 2.61
TRADD-201ENST00000345057 NBPF7P0C2Y1 421 aaPredicted RBP31.32■■■□□ 2.6
TRADD-201ENST00000345057 BARGINQ6ZT62 677 aa31.32■■■□□ 2.6
TRADD-201ENST00000345057 METTL22Q9BUU2 404 aaPredicted RBP31.32■■■□□ 2.6
TRADD-201ENST00000345057 DDRGK1Q96HY6 314 aa31.31■■■□□ 2.6
TRADD-201ENST00000345057 UTYO14607 1347 aa31.31■■■□□ 2.6
TRADD-201ENST00000345057 PNMA6EA0A0J9YXQ4 647 aa31.31■■■□□ 2.6
TRADD-201ENST00000345057 DDB1Q16531 1140 aa31.31■■■□□ 2.6
TRADD-201ENST00000345057 PIGBQ92521 554 aa31.31■■■□□ 2.6
TRADD-201ENST00000345057 PTCD1O75127 700 aaKnown RBP31.3■■■□□ 2.6
TRADD-201ENST00000345057 ITGB4P16144 1822 aa31.3■■■□□ 2.6
TRADD-201ENST00000345057 BCL9O00512 1426 aa31.3■■■□□ 2.6
TRADD-201ENST00000345057 GRM8O00222 908 aa31.29■■■□□ 2.6
TRADD-201ENST00000345057 PLBD2Q8NHP8 589 aa31.29■■■□□ 2.6
TRADD-201ENST00000345057 MTX1Q13505 466 aa31.28■■■□□ 2.6
TRADD-201ENST00000345057 POLA2Q14181 598 aa31.28■■■□□ 2.6
TRADD-201ENST00000345057 LRRCC1Q9C099 1032 aa31.28■■■□□ 2.6
TRADD-201ENST00000345057 SPATA31A6Q5VVP1 1343 aa31.28■■■□□ 2.6
TRADD-201ENST00000345057 CWF19L2Q2TBE0 894 aaKnown RBP31.27■■■□□ 2.6
TRADD-201ENST00000345057 PPP1R42Q7Z4L9 355 aa31.27■■■□□ 2.6
TRADD-201ENST00000345057 UNC5CLQ8IV45 518 aa31.27■■■□□ 2.6
TRADD-201ENST00000345057 PLEKHM2Q8IWE5 1019 aa31.27■■■□□ 2.6
TRADD-201ENST00000345057 EIF5BO60841 1220 aaKnown RBP31.27■■■□□ 2.6
TRADD-201ENST00000345057 RAB11FIP3O75154 756 aa31.27■■■□□ 2.6
TRADD-201ENST00000345057 HSP90AB4PQ58FF6 505 aa31.27■■■□□ 2.6
TRADD-201ENST00000345057 CCDC9Q9Y3X0 531 aaKnown RBP31.27■■■□□ 2.6
TRADD-201ENST00000345057 ATG3Q9NT62 314 aa31.25■■■□□ 2.59
TRADD-201ENST00000345057 NEURL1BA8MQ27 555 aa31.25■■■□□ 2.59
TRADD-201ENST00000345057 SRGAP3O43295 1099 aa31.25■■■□□ 2.59
TRADD-201ENST00000345057 EXOC6BQ9Y2D4 811 aa31.25■■■□□ 2.59
TRADD-201ENST00000345057 IGKV5-2P06315 115 aa31.24■■■□□ 2.59
TRADD-201ENST00000345057 MYD88Q99836 296 aa31.24■■■□□ 2.59
TRADD-201ENST00000345057 STARD3NLO95772 234 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 ASAP1Q9ULH1 1129 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 ARFGEF2Q9Y6D5 1785 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 NBPF26B4DH59 902 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 APBB1O00213 710 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 NBPF14Q5TI25 921 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 NBPF10Q6P3W6 841 aaKnown RBP31.23■■■□□ 2.59
TRADD-201ENST00000345057 NBPF15Q8N660 670 aa31.23■■■□□ 2.59
TRADD-201ENST00000345057 GCKRQ14397 625 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms