RNA–Protein interactions for RNA: ENST00000344222.5

ZNF550-202, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-202ENST00000344222 PANK1Q8TE04 598 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 ARHGEF1Q92888 912 aaKnown RBP7.56□□□□□ -1.2
ZNF550-202ENST00000344222 NPATQ14207 1427 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 PLEKHG3A1L390 1219 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 TRIM66O15016 1216 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 BMS1Q14692 1282 aaKnown RBP7.56□□□□□ -1.2
ZNF550-202ENST00000344222 FBXO38Q6PIJ6 1188 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 RNF217Q8TC41 542 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 TTC12Q9H892 705 aaPredicted RBP7.56□□□□□ -1.2
ZNF550-202ENST00000344222 CABP2Q9NPB3 220 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 YTHDC2Q9H6S0 1430 aaKnown RBP7.56□□□□□ -1.2
ZNF550-202ENST00000344222 CAMSAP1Q5T5Y3 1602 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 PIK3R4Q99570 1358 aa7.56□□□□□ -1.2
ZNF550-202ENST00000344222 FECHP22830 423 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 PPP2R1AP30153 589 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 HSPA2P54652 639 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 PDE4DQ08499 809 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 CCDC93Q567U6 631 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 SYT10Q6XYQ8 523 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 SLC26A8Q96RN1 970 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 RASSF4Q9H2L5 321 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
ZNF550-202ENST00000344222 TMEM131LA2VDJ0 1609 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 SYCE3A1L190 88 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 KLHL33A6NCF5 533 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 MAP9Q49MG5 647 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 ZNF397Q8NF99 534 aaPredicted RBP7.55□□□□□ -1.2
ZNF550-202ENST00000344222 PSD3Q9NYI0 1048 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
ZNF550-202ENST00000344222 UPF2Q9HAU5 1272 aaKnown RBP7.55□□□□□ -1.2
ZNF550-202ENST00000344222 C21orf2O43822 256 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 NUCB1Q02818 461 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 RRP7BPQ9NSQ0 103 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 BMP2KLQ5H9B9 411 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 BARGINQ6ZT62 677 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 RBM42Q9BTD8 480 aaKnown RBP7.54□□□□□ -1.2
ZNF550-202ENST00000344222 DIAPH3Q9NSV4 1193 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 DIP2CQ9Y2E4 1556 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 PTMAP06454 111 aaKnown RBP7.54□□□□□ -1.2
ZNF550-202ENST00000344222 C1QBPQ07021 282 aaKnown RBP7.54□□□□□ -1.2
ZNF550-202ENST00000344222 C3P01024 1663 aa7.54□□□□□ -1.2
ZNF550-202ENST00000344222 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 BANK1Q8NDB2 785 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 COG6Q9Y2V7 657 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 SPAG9O60271 1321 aaKnown RBP7.53□□□□□ -1.2
ZNF550-202ENST00000344222 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 ATAD2Q6PL18 1390 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 CC2D1BQ5T0F9 858 aaKnown RBP7.53□□□□□ -1.2
ZNF550-202ENST00000344222 FAXDC2Q96IV6 333 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 ZSCAN16Q9H4T2 348 aaPredicted RBP7.53□□□□□ -1.2
ZNF550-202ENST00000344222 L2HGDHQ9H9P8 463 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 EXOC6BQ9Y2D4 811 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 BRD1O95696 1058 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 CXorf56Q9H5V9 222 aa7.53□□□□□ -1.2
ZNF550-202ENST00000344222 ARHGEF28Q8N1W1 1705 aaKnown RBP7.52□□□□□ -1.21
ZNF550-202ENST00000344222 GTF2A1P52655 376 aaPredicted RBP7.52□□□□□ -1.21
ZNF550-202ENST00000344222 SEMA3FQ13275 785 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 DNAJC21Q5F1R6 531 aaKnown RBP7.52□□□□□ -1.21
ZNF550-202ENST00000344222 NBPF11Q86T75 865 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 FAM184AQ8NB25 1140 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 CARNS1A5YM72 827 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 KDM4AO75164 1064 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 MCTP1Q6DN14 999 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.52□□□□□ -1.21
ZNF550-202ENST00000344222 CHAMP1Q96JM3 812 aa7.52□□□□□ -1.21
ZNF550-202ENST00000344222 ZNF777Q9ULD5 760 aaPredicted RBP7.52□□□□□ -1.21
ZNF550-202ENST00000344222 COL3A1P02461 1466 aaPredicted RBP7.52□□□□□ -1.21
ZNF550-202ENST00000344222 PPIP5K1Q6PFW1 1433 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 MVPQ14764 893 aaKnown RBP7.51□□□□□ -1.21
ZNF550-202ENST00000344222 GPIHBP1Q8IV16 184 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 STK26Q9P289 416 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 RGS17Q9UGC6 210 aaPredicted RBP7.51□□□□□ -1.21
ZNF550-202ENST00000344222 ADCY5O95622 1261 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 NUCB2P80303 420 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 ZC3H12AQ5D1E8 599 aaKnown RBP7.51□□□□□ -1.21
ZNF550-202ENST00000344222 JMYQ8N9B5 988 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 FBXO22Q8NEZ5 403 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 CEP89Q96ST8 783 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 TSPY26PQ9H489 355 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 JRKLQ9Y4A0 524 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 QRICH2Q9H0J4 1663 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 ERVK-7P63135 1459 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
ZNF550-202ENST00000344222 FOXD4L5Q5VV16 416 aaPredicted RBP7.51□□□□□ -1.21
ZNF550-202ENST00000344222 FOXD4L4Q8WXT5 416 aaPredicted RBP7.51□□□□□ -1.21
ZNF550-202ENST00000344222 TATDN2Q93075 761 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 SUFUQ9UMX1 484 aa7.51□□□□□ -1.21
ZNF550-202ENST00000344222 ST5P78524 1137 aa7.5□□□□□ -1.21
ZNF550-202ENST00000344222 CUL4AQ13619 759 aa7.5□□□□□ -1.21
ZNF550-202ENST00000344222 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.5□□□□□ -1.21
ZNF550-202ENST00000344222 FBXO18Q8NFZ0 1043 aa7.5□□□□□ -1.21
ZNF550-202ENST00000344222 TBC1D22AQ8WUA7 517 aa7.5□□□□□ -1.21
ZNF550-202ENST00000344222 SMARCE1Q969G3 411 aa7.5□□□□□ -1.21
ZNF550-202ENST00000344222 PLA2G4DQ86XP0 818 aa7.5□□□□□ -1.21
ZNF550-202ENST00000344222 NLRP7Q8WX94 980 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms