RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 HYPKQ9NX55 129 aa27.81■■■□□ 2.04
CACNB1-201ENST00000344140 TOGARAM1Q9Y4F4 1720 aa27.81■■■□□ 2.04
CACNB1-201ENST00000344140 PHAXQ9H814 394 aaKnown RBP27.81■■■□□ 2.04
CACNB1-201ENST00000344140 F6X3S4 739 aa27.8■■■□□ 2.04
CACNB1-201ENST00000344140 DDX21Q9NR30 783 aaKnown RBP eCLIP27.8■■■□□ 2.04
CACNB1-201ENST00000344140 HDAC1Q13547 482 aaPredicted RBP27.79■■■□□ 2.04
CACNB1-201ENST00000344140 SLC4A10Q6U841 1118 aa27.79■■■□□ 2.04
CACNB1-201ENST00000344140 PXDNLA1KZ92 1463 aa27.79■■■□□ 2.04
CACNB1-201ENST00000344140 PAPPAQ13219 1627 aa27.79■■■□□ 2.04
CACNB1-201ENST00000344140 A0A0G2JS52 829 aa27.78■■■□□ 2.04
CACNB1-201ENST00000344140 MYT1Q01538 1121 aa27.78■■■□□ 2.04
CACNB1-201ENST00000344140 C5P01031 1676 aa27.76■■■□□ 2.04
CACNB1-201ENST00000344140 RGS17Q9UGC6 210 aaPredicted RBP27.76■■■□□ 2.04
CACNB1-201ENST00000344140 UBR2Q8IWV8 1755 aa27.76■■■□□ 2.04
CACNB1-201ENST00000344140 RBM6P78332 1123 aaKnown RBP27.76■■■□□ 2.03
CACNB1-201ENST00000344140 PIGBQ92521 554 aa27.76■■■□□ 2.03
CACNB1-201ENST00000344140 KCPQ6ZWJ8 1503 aa27.75■■■□□ 2.03
CACNB1-201ENST00000344140 PDIA6Q15084 440 aa27.74■■■□□ 2.03
CACNB1-201ENST00000344140 ANXA1P04083 346 aa27.74■■■□□ 2.03
CACNB1-201ENST00000344140 PROSER3Q2NL68 480 aa27.74■■■□□ 2.03
CACNB1-201ENST00000344140 USP16Q9Y5T5 823 aa27.74■■■□□ 2.03
CACNB1-201ENST00000344140 BCL9O00512 1426 aa27.73■■■□□ 2.03
CACNB1-201ENST00000344140 ERBB4Q15303 1308 aa27.72■■■□□ 2.03
CACNB1-201ENST00000344140 DDX58O95786 925 aaKnown RBP27.72■■■□□ 2.03
CACNB1-201ENST00000344140 RXRBP28702 533 aa27.72■■■□□ 2.03
CACNB1-201ENST00000344140 DNAAF4Q8WXU2 420 aa27.72■■■□□ 2.03
CACNB1-201ENST00000344140 PI4KAP2A4QPH2 592 aa27.71■■■□□ 2.03
CACNB1-201ENST00000344140 PI4KAP1Q8N8J0 262 aa27.71■■■□□ 2.03
CACNB1-201ENST00000344140 MARCH10Q8NA82 808 aaPredicted RBP27.71■■■□□ 2.03
CACNB1-201ENST00000344140 THSD7AQ9UPZ6 1657 aa27.71■■■□□ 2.03
CACNB1-201ENST00000344140 LAMB4A4D0S4 1761 aa27.7■■■□□ 2.03
CACNB1-201ENST00000344140 ITGB4P16144 1822 aa27.7■■■□□ 2.03
CACNB1-201ENST00000344140 PTCD1O75127 700 aaKnown RBP27.7■■■□□ 2.02
CACNB1-201ENST00000344140 POTEAQ6S8J7 498 aa27.7■■■□□ 2.02
CACNB1-201ENST00000344140 KSR2Q6VAB6 950 aa27.7■■■□□ 2.02
CACNB1-201ENST00000344140 VSIG10Q8N0Z9 540 aa27.7■■■□□ 2.02
CACNB1-201ENST00000344140 N4BP2Q86UW6 1770 aaPredicted RBP27.7■■■□□ 2.02
CACNB1-201ENST00000344140 MEIS3Q99687 375 aa27.69■■■□□ 2.02
CACNB1-201ENST00000344140 C1orf115Q9H7X2 142 aa27.69■■■□□ 2.02
CACNB1-201ENST00000344140 ATG3Q9NT62 314 aa27.69■■■□□ 2.02
CACNB1-201ENST00000344140 ASAP1Q9ULH1 1129 aa27.69■■■□□ 2.02
CACNB1-201ENST00000344140 ONECUT3O60422 494 aaPredicted RBP27.68■■■□□ 2.02
CACNB1-201ENST00000344140 ADCY9O60503 1353 aa27.68■■■□□ 2.02
CACNB1-201ENST00000344140 GNAI3P08754 354 aa27.68■■■□□ 2.02
CACNB1-201ENST00000344140 TEX13AQ9BXU3 409 aaPredicted RBP27.68■■■□□ 2.02
CACNB1-201ENST00000344140 SRCIN1Q9C0H9 1055 aa27.68■■■□□ 2.02
CACNB1-201ENST00000344140 ATP10DQ9P241 1426 aa27.67■■■□□ 2.02
CACNB1-201ENST00000344140 PRIM1P49642 420 aaKnown RBP27.67■■■□□ 2.02
CACNB1-201ENST00000344140 SEPT12Q8IYM1 358 aa27.67■■■□□ 2.02
CACNB1-201ENST00000344140 SYTL4Q96C24 671 aaPredicted RBP27.67■■■□□ 2.02
CACNB1-201ENST00000344140 MYL6BP14649 208 aa27.66■■■□□ 2.02
CACNB1-201ENST00000344140 RPAP2Q8IXW5 612 aaPredicted RBP27.66■■■□□ 2.02
CACNB1-201ENST00000344140 BEND3Q5T5X7 828 aa27.65■■■□□ 2.02
CACNB1-201ENST00000344140 SMC5Q8IY18 1101 aa27.65■■■□□ 2.02
CACNB1-201ENST00000344140 MAP3K2Q9Y2U5 619 aa27.65■■■□□ 2.02
CACNB1-201ENST00000344140 DOT1LQ8TEK3 1739 aa27.64■■■□□ 2.02
CACNB1-201ENST00000344140 LRP10Q7Z4F1 713 aa27.64■■■□□ 2.02
CACNB1-201ENST00000344140 AIMP1Q12904 312 aaKnown RBP27.63■■■□□ 2.01
CACNB1-201ENST00000344140 XAGE3Q8WTP9 111 aa27.63■■■□□ 2.01
CACNB1-201ENST00000344140 GNAI2P04899 355 aa27.62■■■□□ 2.01
CACNB1-201ENST00000344140 COPS6Q7L5N1 327 aa27.62■■■□□ 2.01
CACNB1-201ENST00000344140 ANKRD44Q8N8A2 993 aa27.62■■■□□ 2.01
CACNB1-201ENST00000344140 ALDH1L1O75891 902 aa27.61■■■□□ 2.01
CACNB1-201ENST00000344140 SIRT2Q8IXJ6 389 aa27.61■■■□□ 2.01
CACNB1-201ENST00000344140 KAT6BQ8WYB5 2073 aa27.61■■■□□ 2.01
CACNB1-201ENST00000344140 GCC1Q96CN9 775 aa27.61■■■□□ 2.01
CACNB1-201ENST00000344140 USP44Q9H0E7 712 aa27.61■■■□□ 2.01
CACNB1-201ENST00000344140 TSHZ2Q9NRE2 1034 aa27.61■■■□□ 2.01
CACNB1-201ENST00000344140 CEP85Q6P2H3 762 aa27.6■■■□□ 2.01
CACNB1-201ENST00000344140 RIC3Q7Z5B4 369 aa27.6■■■□□ 2.01
CACNB1-201ENST00000344140 RBM42Q9BTD8 480 aaKnown RBP27.6■■■□□ 2.01
CACNB1-201ENST00000344140 STARD3NLO95772 234 aa27.59■■■□□ 2.01
CACNB1-201ENST00000344140 PDZRN3Q9UPQ7 1066 aa27.59■■■□□ 2.01
CACNB1-201ENST00000344140 NBPF26B4DH59 902 aa27.59■■■□□ 2.01
CACNB1-201ENST00000344140 NBPF14Q5TI25 921 aa27.59■■■□□ 2.01
CACNB1-201ENST00000344140 NBPF10Q6P3W6 841 aaKnown RBP27.59■■■□□ 2.01
CACNB1-201ENST00000344140 SKAP1Q86WV1 359 aa27.59■■■□□ 2.01
CACNB1-201ENST00000344140 NBPF15Q8N660 670 aa27.59■■■□□ 2.01
CACNB1-201ENST00000344140 UBTFL1P0CB47 393 aaPredicted RBP27.58■■■□□ 2.01
CACNB1-201ENST00000344140 ANKRD13DQ6ZTN6 518 aa27.58■■■□□ 2.01
CACNB1-201ENST00000344140 LINS1Q8NG48 757 aa27.58■■■□□ 2.01
CACNB1-201ENST00000344140 ACSBG1Q96GR2 724 aa27.57■■■□□ 2
CACNB1-201ENST00000344140 IBTKQ9P2D0 1353 aaPredicted RBP27.57■■■□□ 2
CACNB1-201ENST00000344140 HMMRO75330 724 aa27.57■■■□□ 2
CACNB1-201ENST00000344140 A1BGP04217 495 aa27.57■■■□□ 2
CACNB1-201ENST00000344140 PIP4K2AP48426 406 aaPredicted RBP27.57■■■□□ 2
CACNB1-201ENST00000344140 NEXNQ0ZGT2 675 aa27.57■■■□□ 2
CACNB1-201ENST00000344140 BRWD3Q6RI45 1802 aa27.56■■■□□ 2
CACNB1-201ENST00000344140 DNAJC10Q8IXB1 793 aa27.56■■■□□ 2
CACNB1-201ENST00000344140 RGS3P49796 1198 aa27.55■■■□□ 2
CACNB1-201ENST00000344140 METTL22Q9BUU2 404 aaPredicted RBP27.55■■■□□ 2
CACNB1-201ENST00000344140 HDAC5Q9UQL6 1122 aa27.55■■■□□ 2
CACNB1-201ENST00000344140 KRT27Q7Z3Y8 459 aa27.54■■■□□ 2
CACNB1-201ENST00000344140 PLBD2Q8NHP8 589 aa27.54■■■□□ 2
CACNB1-201ENST00000344140 SMARCC1Q92922 1105 aaPredicted RBP27.53■■■□□ 2
CACNB1-201ENST00000344140 NUCB1Q02818 461 aa27.53■■■□□ 2
CACNB1-201ENST00000344140 DCTPP1Q9H773 170 aa27.53■■■□□ 2
CACNB1-201ENST00000344140 SLC4A9Q96Q91 983 aa27.52■■■□□ 2
CACNB1-201ENST00000344140 LRRFIP2Q9Y608 721 aaKnown RBP27.52■■■□□ 2
CACNB1-201ENST00000344140 C9orf78Q9NZ63 289 aaPredicted RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms