RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
CT55-202ENST00000344129 RGS12O14924 1447 aa16.15■□□□□ 0.18
CT55-202ENST00000344129 ABCC4O15439 1325 aa16.15■□□□□ 0.18
CT55-202ENST00000344129 PTPRCP08575 1304 aa16.15■□□□□ 0.18
CT55-202ENST00000344129 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
CT55-202ENST00000344129 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
CT55-202ENST00000344129 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
CT55-202ENST00000344129 F6X3S4 739 aa16.13■□□□□ 0.17
CT55-202ENST00000344129 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
CT55-202ENST00000344129 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
CT55-202ENST00000344129 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
CT55-202ENST00000344129 DBF4Q9UBU7 674 aaPredicted RBP16.13■□□□□ 0.17
CT55-202ENST00000344129 KCNQ2O43526 872 aa16.12■□□□□ 0.17
CT55-202ENST00000344129 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
CT55-202ENST00000344129 ONECUT3O60422 494 aaPredicted RBP16.11■□□□□ 0.17
CT55-202ENST00000344129 MYL6BP14649 208 aa16.11■□□□□ 0.17
CT55-202ENST00000344129 PDIA6Q15084 440 aa16.11■□□□□ 0.17
CT55-202ENST00000344129 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
CT55-202ENST00000344129 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
CT55-202ENST00000344129 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
CT55-202ENST00000344129 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
CT55-202ENST00000344129 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
CT55-202ENST00000344129 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
CT55-202ENST00000344129 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.17
CT55-202ENST00000344129 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.17
CT55-202ENST00000344129 DNAJC10Q8IXB1 793 aa16.08■□□□□ 0.17
CT55-202ENST00000344129 HYPKQ9NX55 129 aa16.08■□□□□ 0.17
CT55-202ENST00000344129 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
CT55-202ENST00000344129 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
CT55-202ENST00000344129 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
CT55-202ENST00000344129 A1BGP04217 495 aa16.07■□□□□ 0.16
CT55-202ENST00000344129 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
CT55-202ENST00000344129 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
CT55-202ENST00000344129 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
CT55-202ENST00000344129 XAGE3Q8WTP9 111 aa16.06■□□□□ 0.16
CT55-202ENST00000344129 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
CT55-202ENST00000344129 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 NBPF14Q5TI25 921 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
CT55-202ENST00000344129 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 ZBTB40Q9NUA8 1239 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 ADCY9O60503 1353 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
CT55-202ENST00000344129 RBM6P78332 1123 aaKnown RBP16.05■□□□□ 0.16
CT55-202ENST00000344129 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
CT55-202ENST00000344129 AAMPQ13685 434 aa16.04■□□□□ 0.16
CT55-202ENST00000344129 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
CT55-202ENST00000344129 BRWD3Q6RI45 1802 aa16.04■□□□□ 0.16
CT55-202ENST00000344129 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
CT55-202ENST00000344129 DNAAF4Q8WXU2 420 aa16.03■□□□□ 0.16
CT55-202ENST00000344129 TEX13AQ9BXU3 409 aaPredicted RBP16.03■□□□□ 0.16
CT55-202ENST00000344129 MAP3K2Q9Y2U5 619 aa16.03■□□□□ 0.16
CT55-202ENST00000344129 TJP1Q07157 1748 aa16.03■□□□□ 0.16
CT55-202ENST00000344129 IGHDP01880 384 aa16.02■□□□□ 0.16
CT55-202ENST00000344129 KSR2Q6VAB6 950 aa16.02■□□□□ 0.16
CT55-202ENST00000344129 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
CT55-202ENST00000344129 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
CT55-202ENST00000344129 NHSQ6T4R5 1651 aa16.02■□□□□ 0.16
CT55-202ENST00000344129 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
CT55-202ENST00000344129 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.15
CT55-202ENST00000344129 STARD3NLO95772 234 aa16.02■□□□□ 0.15
CT55-202ENST00000344129 DDX58O95786 925 aaKnown RBP16.02■□□□□ 0.15
CT55-202ENST00000344129 ATP6V1AP38606 617 aa16.02■□□□□ 0.15
CT55-202ENST00000344129 SIK1P57059 783 aa16.02■□□□□ 0.15
CT55-202ENST00000344129 SMARCC1Q92922 1105 aaPredicted RBP16.02■□□□□ 0.15
CT55-202ENST00000344129 MEIS3Q99687 375 aa16.02■□□□□ 0.15
CT55-202ENST00000344129 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.15
CT55-202ENST00000344129 ZNF330Q9Y3S2 320 aaPredicted RBP16.02■□□□□ 0.15
CT55-202ENST00000344129 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
CT55-202ENST00000344129 RIC3Q7Z5B4 369 aa16.01■□□□□ 0.15
CT55-202ENST00000344129 CHMP4BQ9H444 224 aaKnown RBP16.01■□□□□ 0.15
CT55-202ENST00000344129 BTAF1O14981 1849 aa16.01■□□□□ 0.15
CT55-202ENST00000344129 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
CT55-202ENST00000344129 RXRBP28702 533 aa16■□□□□ 0.15
CT55-202ENST00000344129 BEND3Q5T5X7 828 aa16■□□□□ 0.15
CT55-202ENST00000344129 SRCIN1Q9C0H9 1055 aa16■□□□□ 0.15
CT55-202ENST00000344129 SBF2Q86WG5 1849 aa16■□□□□ 0.15
CT55-202ENST00000344129 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
CT55-202ENST00000344129 ITPK1Q13572 414 aa15.99■□□□□ 0.15
CT55-202ENST00000344129 TTLL7Q6ZT98 887 aa15.99■□□□□ 0.15
CT55-202ENST00000344129 KCNQ4P56696 695 aa15.99■□□□□ 0.15
CT55-202ENST00000344129 POTEAQ6S8J7 498 aa15.99■□□□□ 0.15
CT55-202ENST00000344129 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
CT55-202ENST00000344129 CENPQQ7L2Z9 268 aaPredicted RBP15.98■□□□□ 0.15
CT55-202ENST00000344129 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
CT55-202ENST00000344129 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
CT55-202ENST00000344129 MYD88Q99836 296 aa15.97■□□□□ 0.15
CT55-202ENST00000344129 ATP10DQ9P241 1426 aa15.97■□□□□ 0.15
CT55-202ENST00000344129 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
CT55-202ENST00000344129 ARXQ96QS3 562 aa15.97■□□□□ 0.15
CT55-202ENST00000344129 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
CT55-202ENST00000344129 ZBTB3Q9H5J0 574 aa15.97■□□□□ 0.15
CT55-202ENST00000344129 SKAP1Q86WV1 359 aa15.96■□□□□ 0.15
CT55-202ENST00000344129 PLBD2Q8NHP8 589 aa15.96■□□□□ 0.15
CT55-202ENST00000344129 METTL22Q9BUU2 404 aaPredicted RBP15.96■□□□□ 0.15
CT55-202ENST00000344129 USP44Q9H0E7 712 aa15.96■□□□□ 0.15
CT55-202ENST00000344129 ARFGEF2Q9Y6D5 1785 aa15.95■□□□□ 0.14
CT55-202ENST00000344129 IGKV5-2P06315 115 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms