RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
RPL28-201ENST00000344063 CWC15Q9P013 229 aaKnown RBP12.83□□□□□ -0.36
RPL28-201ENST00000344063 ABCC1P33527 1531 aa12.83□□□□□ -0.36
RPL28-201ENST00000344063 SAMD9LQ8IVG5 1584 aa12.83□□□□□ -0.36
RPL28-201ENST00000344063 PDE4CQ08493 712 aa12.83□□□□□ -0.36
RPL28-201ENST00000344063 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
RPL28-201ENST00000344063 PRDM15P57071 1507 aaPredicted RBP12.83□□□□□ -0.36
RPL28-201ENST00000344063 POGZQ7Z3K3 1410 aa12.83□□□□□ -0.36
RPL28-201ENST00000344063 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
RPL28-201ENST00000344063 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.36
RPL28-201ENST00000344063 TFIP11Q9UBB9 837 aaKnown RBP12.83□□□□□ -0.36
RPL28-201ENST00000344063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.36
RPL28-201ENST00000344063 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 NPATQ14207 1427 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 ME1P48163 572 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 CEP85Q6P2H3 762 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 ZBTB9Q96C00 473 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
RPL28-201ENST00000344063 ATP10AO60312 1499 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 CHAMP1Q96JM3 812 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
RPL28-201ENST00000344063 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 JMYQ8N9B5 988 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 ECHDC1Q9NTX5 307 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
RPL28-201ENST00000344063 PATL2C9JE40 543 aaKnown RBP12.81□□□□□ -0.36
RPL28-201ENST00000344063 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
RPL28-201ENST00000344063 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 SMAP1Q8IYB5 467 aaPredicted RBP12.81□□□□□ -0.36
RPL28-201ENST00000344063 FSD2A1L4K1 749 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
RPL28-201ENST00000344063 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 TTC21AQ8NDW8 1320 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 CCP110O43303 1012 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 STX6O43752 255 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 MYL6BP14649 208 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 UBXN4Q92575 508 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 BCORL1Q5H9F3 1711 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 DTNBO60941 627 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 LEKR1Q6ZMV7 388 aa12.81□□□□□ -0.36
RPL28-201ENST00000344063 MYO5CQ9NQX4 1742 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 ATP8B2P98198 1209 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 CCDC186Q7Z3E2 898 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 CEP57L1Q8IYX8 460 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 RIMS2Q9UQ26 1411 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 IPO7O95373 1038 aaKnown RBP12.8□□□□□ -0.36
RPL28-201ENST00000344063 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
RPL28-201ENST00000344063 SERPINC1P01008 464 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 ATP2B1P20020 1258 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
RPL28-201ENST00000344063 UBE2HP62256 183 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 SART3Q15020 963 aaKnown RBP12.79□□□□□ -0.36
RPL28-201ENST00000344063 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
RPL28-201ENST00000344063 USP26Q9BXU7 913 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 ERVK-7P63135 1459 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 CABP4P57796 275 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 TRPM2O94759 1503 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 PLA2R1Q13018 1463 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 TTC37Q6PGP7 1564 aa12.79□□□□□ -0.36
RPL28-201ENST00000344063 VGLL3A8MV65 326 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 XBP1P17861 261 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 AEBP2Q6ZN18 517 aaPredicted RBP12.78□□□□□ -0.36
RPL28-201ENST00000344063 KIF18AQ8NI77 898 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
RPL28-201ENST00000344063 BOLA2Q9H3K6 86 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 ANTXR1Q9H6X2 564 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
RPL28-201ENST00000344063 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 TMCO3Q6UWJ1 677 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 AK7Q96M32 723 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
RPL28-201ENST00000344063 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 PREX2Q70Z35 1606 aa12.78□□□□□ -0.36
RPL28-201ENST00000344063 PPFIA3O75145 1194 aa12.77□□□□□ -0.36
RPL28-201ENST00000344063 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.36
RPL28-201ENST00000344063 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.36
RPL28-201ENST00000344063 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.36
RPL28-201ENST00000344063 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.36
RPL28-201ENST00000344063 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms