RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
PDCD1-202ENST00000343705 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
PDCD1-202ENST00000343705 NARFQ9UHQ1 456 aa16.27■□□□□ 0.2
PDCD1-202ENST00000343705 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
PDCD1-202ENST00000343705 PNISRQ8TF01 805 aaKnown RBP16.26■□□□□ 0.19
PDCD1-202ENST00000343705 COL15A1P39059 1388 aa16.26■□□□□ 0.19
PDCD1-202ENST00000343705 TAF7Q15545 349 aaPredicted RBP16.25■□□□□ 0.19
PDCD1-202ENST00000343705 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
PDCD1-202ENST00000343705 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
PDCD1-202ENST00000343705 IL6STP40189 918 aaPredicted RBP16.24■□□□□ 0.19
PDCD1-202ENST00000343705 NFE2L2Q16236 605 aa16.24■□□□□ 0.19
PDCD1-202ENST00000343705 MCM10Q7L590 875 aa16.24■□□□□ 0.19
PDCD1-202ENST00000343705 C10orf71Q711Q0 1435 aa16.23■□□□□ 0.19
PDCD1-202ENST00000343705 SNRPA1P09661 255 aaKnown RBP16.23■□□□□ 0.19
PDCD1-202ENST00000343705 YBX3P16989 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
PDCD1-202ENST00000343705 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
PDCD1-202ENST00000343705 EIF5P55010 431 aaKnown RBP16.23■□□□□ 0.19
PDCD1-202ENST00000343705 FKBP8Q14318 412 aa16.23■□□□□ 0.19
PDCD1-202ENST00000343705 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
PDCD1-202ENST00000343705 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
PDCD1-202ENST00000343705 TM4SF1P30408 202 aa16.22■□□□□ 0.19
PDCD1-202ENST00000343705 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
PDCD1-202ENST00000343705 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
PDCD1-202ENST00000343705 N4BP2Q86UW6 1770 aaPredicted RBP16.19■□□□□ 0.18
PDCD1-202ENST00000343705 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
PDCD1-202ENST00000343705 POLRMTO00411 1230 aaKnown RBP16.19■□□□□ 0.18
PDCD1-202ENST00000343705 KCNQ3O43525 872 aa16.19■□□□□ 0.18
PDCD1-202ENST00000343705 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
PDCD1-202ENST00000343705 DDR1Q08345 913 aa16.18■□□□□ 0.18
PDCD1-202ENST00000343705 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDCD1-202ENST00000343705 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
PDCD1-202ENST00000343705 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
PDCD1-202ENST00000343705 KIAA1551Q9HCM1 1747 aa16.18■□□□□ 0.18
PDCD1-202ENST00000343705 BRCA1P38398 1863 aaKnown RBP16.17■□□□□ 0.18
PDCD1-202ENST00000343705 RGL2O15211 777 aa16.17■□□□□ 0.18
PDCD1-202ENST00000343705 A1BGP04217 495 aa16.17■□□□□ 0.18
PDCD1-202ENST00000343705 NFIXQ14938 502 aa16.17■□□□□ 0.18
PDCD1-202ENST00000343705 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
PDCD1-202ENST00000343705 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
PDCD1-202ENST00000343705 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
PDCD1-202ENST00000343705 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
PDCD1-202ENST00000343705 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
PDCD1-202ENST00000343705 A0A0G2JLW4 131 aa16.16■□□□□ 0.18
PDCD1-202ENST00000343705 RIPK4P57078 832 aa16.16■□□□□ 0.18
PDCD1-202ENST00000343705 BCL2L12Q9HB09 334 aa16.16■□□□□ 0.18
PDCD1-202ENST00000343705 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
PDCD1-202ENST00000343705 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
PDCD1-202ENST00000343705 UTRNP46939 3433 aa16.16■□□□□ 0.18
PDCD1-202ENST00000343705 SCN7AQ01118 1682 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 ARFGEF1Q9Y6D6 1849 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 SERPINB2P05120 415 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 DPEP1P16444 411 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 BCS1LQ9Y276 419 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
PDCD1-202ENST00000343705 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
PDCD1-202ENST00000343705 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
PDCD1-202ENST00000343705 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
PDCD1-202ENST00000343705 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
PDCD1-202ENST00000343705 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
PDCD1-202ENST00000343705 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
PDCD1-202ENST00000343705 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
PDCD1-202ENST00000343705 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
PDCD1-202ENST00000343705 KCNA3P22001 575 aa16.12■□□□□ 0.17
PDCD1-202ENST00000343705 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
PDCD1-202ENST00000343705 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
PDCD1-202ENST00000343705 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
PDCD1-202ENST00000343705 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
PDCD1-202ENST00000343705 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
PDCD1-202ENST00000343705 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
PDCD1-202ENST00000343705 ERBB4Q15303 1308 aa16.11■□□□□ 0.17
PDCD1-202ENST00000343705 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
PDCD1-202ENST00000343705 PDE6BP35913 854 aa16.1■□□□□ 0.17
PDCD1-202ENST00000343705 BICDL1Q6ZP65 573 aa16.1■□□□□ 0.17
PDCD1-202ENST00000343705 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
PDCD1-202ENST00000343705 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
PDCD1-202ENST00000343705 H0YIN7 160 aa16.09■□□□□ 0.17
PDCD1-202ENST00000343705 ARHGAP27Q6ZUM4 889 aa16.09■□□□□ 0.17
PDCD1-202ENST00000343705 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
PDCD1-202ENST00000343705 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
PDCD1-202ENST00000343705 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
PDCD1-202ENST00000343705 GOLGB1Q14789 3259 aaKnown RBP16.09■□□□□ 0.17
PDCD1-202ENST00000343705 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
PDCD1-202ENST00000343705 NPHP1O15259 732 aa16.08■□□□□ 0.16
PDCD1-202ENST00000343705 ST5P78524 1137 aa16.08■□□□□ 0.16
PDCD1-202ENST00000343705 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
PDCD1-202ENST00000343705 NBPF15Q8N660 670 aa16.08■□□□□ 0.16
PDCD1-202ENST00000343705 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
PDCD1-202ENST00000343705 ERVV-1B6SEH8 477 aa16.07■□□□□ 0.16
PDCD1-202ENST00000343705 CHRNA5P30532 468 aa16.07■□□□□ 0.16
PDCD1-202ENST00000343705 CCDC146Q8IYE0 955 aa16.07■□□□□ 0.16
PDCD1-202ENST00000343705 CNBD1Q8NA66 436 aa16.07■□□□□ 0.16
PDCD1-202ENST00000343705 ADCY9O60503 1353 aa16.07■□□□□ 0.16
PDCD1-202ENST00000343705 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
PDCD1-202ENST00000343705 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
PDCD1-202ENST00000343705 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
PDCD1-202ENST00000343705 TPTE2Q6XPS3 522 aa16.06■□□□□ 0.16
PDCD1-202ENST00000343705 C2CD5Q86YS7 1000 aa16.06■□□□□ 0.16
PDCD1-202ENST00000343705 TTLL6Q8N841 843 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms