RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 ZBTB47Q9UFB7 747 aaPredicted RBP6.03□□□□□ -1.44
VAV3-201ENST00000343258 NUDCQ9Y266 331 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 LY75O60449 1722 aa6.02□□□□□ -1.45
VAV3-201ENST00000343258 MYBBP1AQ9BQG0 1328 aaKnown RBP6.02□□□□□ -1.45
VAV3-201ENST00000343258 CCDC146Q8IYE0 955 aa6.02□□□□□ -1.45
VAV3-201ENST00000343258 GNAT3A8MTJ3 354 aa6.02□□□□□ -1.45
VAV3-201ENST00000343258 FCHSD2O94868 740 aa6.02□□□□□ -1.45
VAV3-201ENST00000343258 SMARCC1Q92922 1105 aaPredicted RBP6.02□□□□□ -1.45
VAV3-201ENST00000343258 SGIP1Q9BQI5 828 aa6.02□□□□□ -1.45
VAV3-201ENST00000343258 MIS18AQ9NYP9 233 aa6.02□□□□□ -1.45
VAV3-201ENST00000343258 MAP3K5Q99683 1374 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 PLEKHG2Q9H7P9 1386 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 CASZ1Q86V15 1759 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 SPON1Q9HCB6 807 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 RRP7AQ9Y3A4 280 aaKnown RBP6.01□□□□□ -1.45
VAV3-201ENST00000343258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.01□□□□□ -1.45
VAV3-201ENST00000343258 PRAMEF22A3QJZ6 481 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 GNPATO15228 680 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 DNAJC10Q8IXB1 793 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 GAS2L2Q8NHY3 880 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 ADAMTS8Q9UP79 889 aa6.01□□□□□ -1.45
VAV3-201ENST00000343258 TUBGCP6Q96RT7 1819 aa6□□□□□ -1.45
VAV3-201ENST00000343258 IRX6P78412 446 aaPredicted RBP6□□□□□ -1.45
VAV3-201ENST00000343258 PAXIP1Q6ZW49 1069 aaPredicted RBP6□□□□□ -1.45
VAV3-201ENST00000343258 ZNF496Q96IT1 587 aaPredicted RBP6□□□□□ -1.45
VAV3-201ENST00000343258 AK7Q96M32 723 aa6□□□□□ -1.45
VAV3-201ENST00000343258 IPO9Q96P70 1041 aaKnown RBP6□□□□□ -1.45
VAV3-201ENST00000343258 MTFR1LQ9H019 292 aa6□□□□□ -1.45
VAV3-201ENST00000343258 CEMIPQ8WUJ3 1361 aa6□□□□□ -1.45
VAV3-201ENST00000343258 SCN11AQ9UI33 1791 aa6□□□□□ -1.45
VAV3-201ENST00000343258 MRC1P22897 1456 aa6□□□□□ -1.45
VAV3-201ENST00000343258 ANP32AP39687 249 aaKnown RBP6□□□□□ -1.45
VAV3-201ENST00000343258 VASPP50552 380 aaPredicted RBP6□□□□□ -1.45
VAV3-201ENST00000343258 NEUROD2Q15784 382 aa6□□□□□ -1.45
VAV3-201ENST00000343258 IFNLR1Q8IU57 520 aaPredicted RBP6□□□□□ -1.45
VAV3-201ENST00000343258 C5P01031 1676 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 RRP9O43818 475 aaKnown RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 CRKLP46109 303 aaKnown RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 PIP4K2AP48426 406 aaPredicted RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 TEFQ10587 303 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 C4BP0C0L5 1744 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 LRP5O75197 1615 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 KCPQ6ZWJ8 1503 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 ADAMTS7Q9UKP4 1686 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 INTS5Q6P9B9 1019 aaKnown RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 ZNF790Q6PG37 636 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 FAM43AQ8N2R8 423 aa5.99□□□□□ -1.45
VAV3-201ENST00000343258 FHDC1Q9C0D6 1143 aaPredicted RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 PPP1R1BQ9UD71 204 aaPredicted RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 SRP68Q9UHB9 627 aaKnown RBP5.99□□□□□ -1.45
VAV3-201ENST00000343258 TAF1LQ8IZX4 1826 aa5.98□□□□□ -1.45
VAV3-201ENST00000343258 MYH14Q7Z406 1995 aaKnown RBP5.98□□□□□ -1.45
VAV3-201ENST00000343258 NFE2L2Q16236 605 aa5.98□□□□□ -1.45
VAV3-201ENST00000343258 ARHGEF1Q92888 912 aaKnown RBP5.98□□□□□ -1.45
VAV3-201ENST00000343258 ZBTB1Q9Y2K1 713 aa5.98□□□□□ -1.45
VAV3-201ENST00000343258 BTBD11A6QL63 1104 aa5.98□□□□□ -1.45
VAV3-201ENST00000343258 CYP19A1P11511 503 aaPredicted RBP5.98□□□□□ -1.45
VAV3-201ENST00000343258 RTF1Q92541 710 aaKnown RBP5.98□□□□□ -1.45
VAV3-201ENST00000343258 ARXQ96QS3 562 aa5.98□□□□□ -1.45
VAV3-201ENST00000343258 TMPOP42166 694 aaKnown RBP5.97□□□□□ -1.45
VAV3-201ENST00000343258 RIPK4P57078 832 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 NLGN2Q8NFZ4 835 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 WWC3Q9ULE0 1092 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 USP16Q9Y5T5 823 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 MAPK8IP3Q9UPT6 1336 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 ANP32CO43423 234 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 RPS6KA4O75676 772 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 A1BGP04217 495 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 HSP90AA1P07900 732 aaKnown RBP5.97□□□□□ -1.45
VAV3-201ENST00000343258 CANXP27824 592 aaKnown RBP5.97□□□□□ -1.45
VAV3-201ENST00000343258 SSFA2P28290 1259 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 GSE1Q14687 1217 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 WDR43Q15061 677 aaKnown RBP eCLIP5.97□□□□□ -1.45
VAV3-201ENST00000343258 TTC5Q8N0Z6 440 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 SYT17Q9BSW7 474 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 TRIM35Q9UPQ4 493 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 RTCBQ9Y3I0 505 aaKnown RBP5.97□□□□□ -1.45
VAV3-201ENST00000343258 LAS1LQ9Y4W2 734 aaKnown RBP5.97□□□□□ -1.45
VAV3-201ENST00000343258 UBR3Q6ZT12 1888 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 CNTNAP4Q9C0A0 1308 aa5.97□□□□□ -1.45
VAV3-201ENST00000343258 TJP1Q07157 1748 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 APAF1O14727 1248 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 KRT24Q2M2I5 525 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 TRAPPC3LQ5T215 181 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 SLC16A10Q8TF71 515 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 CCDC87Q9NVE4 849 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 NAP1L2Q9ULW6 460 aaPredicted RBP5.96□□□□□ -1.46
VAV3-201ENST00000343258 VIRMAQ69YN4 1812 aaKnown RBP5.96□□□□□ -1.46
VAV3-201ENST00000343258 HEG1Q9ULI3 1381 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 GYS1P13807 737 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 TAF7Q15545 349 aaPredicted RBP5.96□□□□□ -1.46
VAV3-201ENST00000343258 RC3H1Q5TC82 1133 aaKnown RBP5.96□□□□□ -1.46
VAV3-201ENST00000343258 CHRDL2Q6WN34 429 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 BBXQ8WY36 941 aaPredicted RBP5.96□□□□□ -1.46
VAV3-201ENST00000343258 MRS2Q9HD23 443 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 FBXO3Q9UK99 471 aa5.96□□□□□ -1.46
VAV3-201ENST00000343258 ZNF330Q9Y3S2 320 aaPredicted RBP5.96□□□□□ -1.46
VAV3-201ENST00000343258 COL5A3P25940 1745 aaPredicted RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 MMP10P09238 476 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 RGS3P49796 1198 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms