RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ATP2B2Q01814 1243 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 SKIDA1Q1XH10 827 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 KRT24Q2M2I5 525 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 PI4KAP1Q8N8J0 262 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 CTNNA3Q9UI47 895 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 CCT2P78371 535 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 BICDL1Q6ZP65 573 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 GNL3LQ9NVN8 582 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 TCOF1Q13428 1488 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 GJB2P29033 226 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 TXLNAP40222 546 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 IMMTQ16891 758 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 PHF8Q9UPP1 1060 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 ADCY5O95622 1261 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 SLC3A2P08195 630 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 SMARCE1Q969G3 411 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 CDK5RAP3Q96JB5 506 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 RAI14Q9P0K7 980 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 MAGEC2Q9UBF1 373 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-202ENST00000343090 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.93e-11■■■■■ 40.5
UBE4B-202ENST00000343090 ZSCAN25Q6NSZ9 544 aa9.45□□□□□ -0.9
UBE4B-202ENST00000343090 CTTNBP2Q8WZ74 1663 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
UBE4B-202ENST00000343090 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 RAB3GAP1Q15042 981 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 C16orf45Q96MC5 204 aaPredicted RBP9.44□□□□□ -0.9
UBE4B-202ENST00000343090 UBAC1Q9BSL1 405 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 LRP2BPQ9P2M1 347 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 ACBD3Q9H3P7 528 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 DBF4Q9UBU7 674 aaPredicted RBP9.44□□□□□ -0.9
UBE4B-202ENST00000343090 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
UBE4B-202ENST00000343090 CCP110O43303 1012 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 RAB11FIP4Q86YS3 637 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 TCEANC2Q96MN5 208 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 TRAPPC8Q9Y2L5 1435 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 A0A087WZG4 1122 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 STX6O43752 255 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 SH2B1Q9NRF2 756 aaPredicted RBP9.43□□□□□ -0.9
UBE4B-202ENST00000343090 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 U3KPZ7 1027 aaPredicted RBP9.43□□□□□ -0.9
UBE4B-202ENST00000343090 CDKL5O76039 1030 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 TNNT1P13805 278 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 NECAB1Q8N987 351 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 DEF6Q9H4E7 631 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
UBE4B-202ENST00000343090 PZPP20742 1482 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 ZHX3Q9H4I2 956 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 DUOX2Q9NRD8 1548 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 PDE1AP54750 535 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 DMTNQ08495 405 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 PLCH2O75038 1416 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 GOLIM4O00461 696 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 POLR3GO15318 223 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 KRT18P05783 430 aaKnown RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 AMOTQ4VCS5 1084 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 KRT222Q8N1A0 295 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.42□□□□□ -0.92e-9■■□□□ 12.9
UBE4B-202ENST00000343090 TTC21BQ7Z4L5 1316 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 CT47A1Q5JQC4 288 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 RHPN1Q8TCX5 695 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 ARHGAP45Q92619 1136 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-202ENST00000343090 CHPF2Q9P2E5 772 aa9.42□□□□□ -0.9
UBE4B-202ENST00000343090 MINDY4BA8MYZ0 360 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 GPATCH11Q8N954 259 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 EVI5LQ96CN4 794 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 DENND4BO75064 1496 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-202ENST00000343090 UBE3BQ7Z3V4 1068 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 SMC5Q8IY18 1101 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 ANKRD44Q8N8A2 993 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 KRI1Q8N9T8 703 aaKnown RBP9.41□□□□□ -0.9
UBE4B-202ENST00000343090 HYPKQ9NX55 129 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 NUP160Q12769 1436 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 WDR62O43379 1518 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 HAND2P61296 217 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms