RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 B4GALNT3Q6L9W6 998 aa17.74■□□□□ 0.43
PMS1-201ENST00000342075 FTSJ3Q8IY81 847 aaKnown RBP17.74■□□□□ 0.43
PMS1-201ENST00000342075 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
PMS1-201ENST00000342075 SNRPA1P09661 255 aaKnown RBP17.74■□□□□ 0.43
PMS1-201ENST00000342075 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
PMS1-201ENST00000342075 RBM6P78332 1123 aaKnown RBP17.73■□□□□ 0.43
PMS1-201ENST00000342075 PDIA6Q15084 440 aa17.73■□□□□ 0.43
PMS1-201ENST00000342075 FLIIQ13045 1269 aa17.73■□□□□ 0.43
PMS1-201ENST00000342075 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
PMS1-201ENST00000342075 DNAJC10Q8IXB1 793 aa17.73■□□□□ 0.43
PMS1-201ENST00000342075 SBF2Q86WG5 1849 aa17.73■□□□□ 0.43
PMS1-201ENST00000342075 A1BGP04217 495 aa17.72■□□□□ 0.43
PMS1-201ENST00000342075 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
PMS1-201ENST00000342075 AIMP1Q12904 312 aaKnown RBP17.72■□□□□ 0.43
PMS1-201ENST00000342075 ITPRIPQ8IWB1 547 aa17.72■□□□□ 0.43
PMS1-201ENST00000342075 BTAF1O14981 1849 aa17.71■□□□□ 0.43
PMS1-201ENST00000342075 HOXB7P09629 217 aa17.71■□□□□ 0.43
PMS1-201ENST00000342075 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
PMS1-201ENST00000342075 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
PMS1-201ENST00000342075 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.42
PMS1-201ENST00000342075 RXRBP28702 533 aa17.7■□□□□ 0.42
PMS1-201ENST00000342075 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
PMS1-201ENST00000342075 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
PMS1-201ENST00000342075 NBPF14Q5TI25 921 aa17.7■□□□□ 0.42
PMS1-201ENST00000342075 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
PMS1-201ENST00000342075 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
PMS1-201ENST00000342075 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
PMS1-201ENST00000342075 PALLDQ8WX93 1383 aa17.69■□□□□ 0.42
PMS1-201ENST00000342075 CACNA1FO60840 1977 aa17.69■□□□□ 0.42
PMS1-201ENST00000342075 IPO8O15397 1037 aaKnown RBP17.69■□□□□ 0.42
PMS1-201ENST00000342075 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
PMS1-201ENST00000342075 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
PMS1-201ENST00000342075 TJP1Q07157 1748 aa17.68■□□□□ 0.42
PMS1-201ENST00000342075 ABCC4O15439 1325 aa17.68■□□□□ 0.42
PMS1-201ENST00000342075 NHSQ6T4R5 1651 aa17.68■□□□□ 0.42
PMS1-201ENST00000342075 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
PMS1-201ENST00000342075 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
PMS1-201ENST00000342075 TRIM37O94972 964 aa17.67■□□□□ 0.42
PMS1-201ENST00000342075 ITPK1Q13572 414 aa17.67■□□□□ 0.42
PMS1-201ENST00000342075 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
PMS1-201ENST00000342075 LOC102724428A0A0B4J2F2 783 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 SIK1P57059 783 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 SMIM5Q71RC9 77 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 DDX21Q9NR30 783 aaKnown RBP eCLIP17.66■□□□□ 0.42
PMS1-201ENST00000342075 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 ATP6V1AP38606 617 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
PMS1-201ENST00000342075 ADCY9O60503 1353 aa17.65■□□□□ 0.42
PMS1-201ENST00000342075 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
PMS1-201ENST00000342075 PTPRCP08575 1304 aa17.65■□□□□ 0.42
PMS1-201ENST00000342075 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
PMS1-201ENST00000342075 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
PMS1-201ENST00000342075 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
PMS1-201ENST00000342075 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
PMS1-201ENST00000342075 CYP19A1P11511 503 aaPredicted RBP17.63■□□□□ 0.41
PMS1-201ENST00000342075 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
PMS1-201ENST00000342075 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
PMS1-201ENST00000342075 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
PMS1-201ENST00000342075 HYPKQ9NX55 129 aa17.62■□□□□ 0.41
PMS1-201ENST00000342075 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
PMS1-201ENST00000342075 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
PMS1-201ENST00000342075 ARXQ96QS3 562 aa17.61■□□□□ 0.41
PMS1-201ENST00000342075 LINC00116Q8NCU8 138 aa17.61■□□□□ 0.41
PMS1-201ENST00000342075 FAM196AQ6ZSG2 479 aa17.6■□□□□ 0.41
PMS1-201ENST00000342075 SKAP1Q86WV1 359 aa17.6■□□□□ 0.41
PMS1-201ENST00000342075 MEIS3Q99687 375 aa17.6■□□□□ 0.41
PMS1-201ENST00000342075 CWF19L2Q2TBE0 894 aaKnown RBP17.6■□□□□ 0.41
PMS1-201ENST00000342075 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
PMS1-201ENST00000342075 ZBTB3Q9H5J0 574 aa17.59■□□□□ 0.41
PMS1-201ENST00000342075 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
PMS1-201ENST00000342075 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
PMS1-201ENST00000342075 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
PMS1-201ENST00000342075 STARD3NLO95772 234 aa17.58■□□□□ 0.41
PMS1-201ENST00000342075 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.41
PMS1-201ENST00000342075 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.41
PMS1-201ENST00000342075 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
PMS1-201ENST00000342075 AMIGO3Q86WK7 504 aa17.58■□□□□ 0.4
PMS1-201ENST00000342075 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.4
PMS1-201ENST00000342075 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.4
PMS1-201ENST00000342075 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
PMS1-201ENST00000342075 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.4
PMS1-201ENST00000342075 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
PMS1-201ENST00000342075 MS4A1P11836 297 aa17.57■□□□□ 0.4
PMS1-201ENST00000342075 KSR2Q6VAB6 950 aa17.57■□□□□ 0.4
PMS1-201ENST00000342075 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
PMS1-201ENST00000342075 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
PMS1-201ENST00000342075 CCNL1Q9UK58 526 aaPredicted RBP17.57■□□□□ 0.4
PMS1-201ENST00000342075 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
PMS1-201ENST00000342075 IGHDP01880 384 aa17.56■□□□□ 0.4
PMS1-201ENST00000342075 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
PMS1-201ENST00000342075 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
PMS1-201ENST00000342075 LY75O60449 1722 aa17.56■□□□□ 0.4
PMS1-201ENST00000342075 ANKRD13DQ6ZTN6 518 aa17.56■□□□□ 0.4
PMS1-201ENST00000342075 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
PMS1-201ENST00000342075 MYD88Q99836 296 aa17.55■□□□□ 0.4
PMS1-201ENST00000342075 TEX13AQ9BXU3 409 aaPredicted RBP17.55■□□□□ 0.4
PMS1-201ENST00000342075 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms